RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 NFYCQ13952 458 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 OTULINQ96BN8 352 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 SEMA6AQ9H2E6 1030 aa12.41□□□□□ -0.42
BDNF-218ENST00000533246 WDR55Q9H6Y2 383 aaPredicted RBP12.41□□□□□ -0.42
BDNF-218ENST00000533246 LINC00854A0A1B0GVQ3 168 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 FAM95CA0A1B0GW59 222 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 HEATR9A2RTY3 570 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 PRR5-ARHGAP8B1AHC4 643 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 MDM4O15151 490 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 MYO1DO94832 1006 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 PGM3O95394 542 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CLPTM1O96005 669 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 KRT8P05787 483 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CCNB1P14635 433 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 HALP42357 657 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ARHGAP8P85298 464 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 NR6A1Q15406 480 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 FXNQ16595 210 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CNPY1Q3B7I2 92 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 GRTP1Q5TC63 336 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 TRMT10BQ6PF06 316 aaKnown RBP12.4□□□□□ -0.42
BDNF-218ENST00000533246 B3GNT6Q6ZMB0 384 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 FAM228AQ86W67 206 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 OR52K2Q8NGK3 314 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CLPTM1LQ96KA5 538 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 TM6SF2Q9BZW4 377 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 COG4Q9H9E3 785 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 STXBP5LQ9Y2K9 1186 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 PCDHB5Q9Y5E4 795 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 BTBD19C9JJ37 291 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 MATN2O00339 956 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 FMO4P31512 558 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 PRKAA1Q13131 559 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 SNX17Q15036 470 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 NOMO1Q15155 1222 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 SYTL3Q4VX76 610 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 FBXO48Q5FWF7 155 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 LCLAT1Q6UWP7 414 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 NT5DC4Q86YG4 428 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 MFSD3Q96ES6 412 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ARL8BQ9NVJ2 186 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 SPASTQ9UBP0 616 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 SPEF1Q9Y4P9 236 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ARPC4-TTLL3A0A0A6YYG9 625 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 TEX28O15482 410 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CLASP2O75122 1294 aaKnown RBP12.4□□□□□ -0.42
BDNF-218ENST00000533246 RBP1P09455 135 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ALADP13716 330 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 FGFR3P22607 806 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 IL1R2P27930 398 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 CA9Q16790 459 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 PFKFB4Q16877 469 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 C9orf57Q5W0N0 161 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 LRRC74BQ6ZQY2 392 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ZBTB49Q6ZSB9 765 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 MARK2Q7KZI7 788 aaKnown RBP12.4□□□□□ -0.42
BDNF-218ENST00000533246 C11orf96Q7Z7L8 435 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 C10orf107Q8IVU9 208 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 SMYD1Q8NB12 490 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 LRRC39Q96DD0 335 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ACE2Q9BYF1 805 aaPredicted RBP12.4□□□□□ -0.42
BDNF-218ENST00000533246 CLPBQ9H078 707 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 DYRK4Q9NR20 520 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
BDNF-218ENST00000533246 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 HCRTO43612 131 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 CYP1A1P04798 512 aaPredicted RBP12.4□□□□□ -0.43
BDNF-218ENST00000533246 RAG1P15918 1043 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 ADRA1BP35368 520 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 MRPS5P82675 430 aaKnown RBP12.4□□□□□ -0.43
BDNF-218ENST00000533246 LIN52Q52LA3 116 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 TTC33Q6PID6 262 aaPredicted RBP12.4□□□□□ -0.43
BDNF-218ENST00000533246 ATAD1Q8NBU5 361 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 MYLPFQ96A32 169 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 AZIN2Q96A70 460 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 CPNE1Q99829 537 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 NIFKQ9BYG3 293 aaKnown RBP12.4□□□□□ -0.43
BDNF-218ENST00000533246 COPS7BQ9H9Q2 264 aaPredicted RBP12.4□□□□□ -0.43
BDNF-218ENST00000533246 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 CHRAC1Q9NRG0 131 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 ZDHHC18Q9NUE0 388 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 TRHDEQ9UKU6 1024 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 GMEB1Q9Y692 573 aa12.4□□□□□ -0.43
BDNF-218ENST00000533246 INPP4BO15327 924 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 GRIA1P42261 906 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 TUBA3CQ13748 450 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 NRF1Q16656 503 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 VWA5B1Q5TIE3 1220 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 OTOP3Q7RTS5 596 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 LDB1Q86U70 411 aaPredicted RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 CATSPER1Q8NEC5 780 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 NKD2Q969F2 451 aaPredicted RBP12.39□□□□□ -0.43
BDNF-218ENST00000533246 FAM162AQ96A26 154 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 VMP1Q96GC9 406 aa12.39□□□□□ -0.43
BDNF-218ENST00000533246 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms