RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 DNASE1L3Q13609 305 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 HERC3Q15034 1050 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 EIF2S3LQ2VIR3 472 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 C6orf52Q5T4I8 152 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 MAP1SQ66K74 1059 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CLIP4Q8N3C7 705 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 TEX47Q8TBZ9 253 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FRMD6Q96NE9 622 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 SYT17Q9BSW7 474 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 GPRC5DQ9NZD1 345 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 GYPCP04921 128 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 DARSP14868 501 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 WEE1P30291 646 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ITGA8P53708 1063 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CCNIQ14094 377 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 GALNT3Q14435 633 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CCNG2Q16589 344 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 UAP1L1Q3KQV9 507 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 BPIFB6Q8NFQ5 453 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 SLC9A6Q92581 669 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 TSEN34Q9BSV6 310 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 NT5C1AQ9BXI3 368 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 NFKBIZQ9BYH8 718 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 RPL26L1Q9UNX3 145 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 H0Y858 1186 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FKBP9O95302 570 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 WEE2P0C1S8 567 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 RPS2P15880 293 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 TCF3P15923 654 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 DNAJB2P25686 324 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ADSSP30520 456 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 RGS4P49798 205 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 PCDH1Q08174 1060 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 GLRA4Q5JXX5 417 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FAM91A1Q658Y4 838 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FKBP9P1Q75LS8 142 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FRMD5Q7Z6J6 570 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 SLC22A16Q86VW1 577 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CARNMT1Q8N4J0 409 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 RNFT2Q96EX2 444 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 C1QTNF1Q9BXJ1 281 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 METTL8Q9H825 291 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 SNX7Q9UNH6 387 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 KCNE2Q9Y6J6 123 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 HEATR9A2RTY3 570 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 CAPN8A6NHC0 703 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 CHURC1-FNTBB4DL54 471 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 E7ENX8 843 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 FOXN1O15353 648 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 ICMTO60725 284 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RNASEH1O60930 286 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 PROCP04070 461 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 TCF7P36402 384 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 CDK16Q00536 496 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 SQLEQ14534 574 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 SNRNP35Q16560 246 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 NADK2Q4G0N4 442 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 CRTC3Q6UUV7 619 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RCOR2Q8IZ40 523 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 NPLOC4Q8TAT6 608 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 SCFD2Q8WU76 684 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 C18orf25Q96B23 403 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 MAELQ96JY0 434 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RTFDC1Q9BY42 306 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 TASP1Q9H6P5 420 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 FAIMQ9NVQ4 179 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 SPASTQ9UBP0 616 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 NEU2Q9Y3R4 380 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RRN3P2A6NIE6 340 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 A8MV72 311 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 H3BNX3 289 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 H7C4K7 107 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 EML1O00423 815 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 KIAA0391O15091 583 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 ATP5BP06576 529 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 PCNAP12004 261 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 IDO1P14902 403 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 NPR3P17342 541 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RASA1P20936 1047 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RBL1P28749 1068 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 HIRAP54198 1017 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 DEFA6Q01524 100 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 ZNF543Q08ER8 600 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 ZNF177Q13360 481 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 GNA13Q14344 377 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 GATAD2BQ8WXI9 593 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 CIDECQ96AQ7 238 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 GFM1Q96RP9 751 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 TMEM246Q9BRR3 403 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 TMEM117Q9H0C3 514 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 RAB6BQ9NRW1 208 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 SACM1LQ9NTJ5 587 aa7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 GPN3Q9UHW5 284 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-210ENST00000533089 XPO7Q9UIA9 1087 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms