RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 HNRNPDQ14103 355 aaKnown RBP19.39■□□□□ 0.69
SMPD1-205ENST00000531303 ZNF235Q14590 738 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 CYTH1Q15438 398 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 TEX44Q53QW1 395 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 ARHGEF18Q6ZSZ5 1173 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 PHTF2Q8N3S3 785 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 CNTD1Q8N815 330 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 ATP11CQ8NB49 1132 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 SLCO2A1Q92959 643 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 TTC17Q96AE7 1141 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 ZNF599Q96NL3 588 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 IL12RB2Q99665 862 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 CINPQ9BW66 212 aaPredicted RBP19.39■□□□□ 0.69
SMPD1-205ENST00000531303 EPC1Q9H2F5 836 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 ELOVL2Q9NXB9 296 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 ERVW-1Q9UQF0 538 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 NEU2Q9Y3R4 380 aa19.39■□□□□ 0.69
SMPD1-205ENST00000531303 TTC24A2A3L6 582 aaPredicted RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 SMAD6O43541 496 aaKnown RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 GCATO75600 419 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 HEXIM1O94992 359 aaKnown RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 HLA-DQB2P05538 268 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 ADCY8P40145 1251 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 EIF2DP41214 584 aaKnown RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 GRIA2P42262 883 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 SULT2A1Q06520 285 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 PTK6Q13882 451 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 PON2Q15165 354 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 P3H1Q32P28 736 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 ACCSLQ4AC99 568 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 SLC44A4Q53GD3 710 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 FAXCQ5TGI0 409 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 RALGPS2Q86X27 583 aaPredicted RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 RNF135Q8IUD6 432 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 UBXN4Q92575 508 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 RTP4Q96DX8 246 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 DPH5Q9H2P9 285 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 C8orf33Q9H7E9 229 aaPredicted RBP19.38■□□□□ 0.69
SMPD1-205ENST00000531303 PCDH9Q9HC56 1237 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 SLC2A4RGQ9NR83 387 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 SLCO3A1Q9UIG8 710 aa19.38■□□□□ 0.69
SMPD1-205ENST00000531303 ANTXRLA6NF34 631 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 C19orf67A6NJJ6 358 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 OPHN1O60890 802 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 ZNF189O75820 626 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 ATP5BP06576 529 aaKnown RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 SERPINH1P50454 418 aaKnown RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 PREPLQ4J6C6 727 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 GLE1Q53GS7 698 aaKnown RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 SYCP2LQ5T4T6 812 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 BBS5Q8N3I7 341 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 PGBD5Q8N414 524 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 TEX26Q8N6G2 289 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 TSEN2Q8NCE0 465 aaKnown RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 FATE1Q969F0 183 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 EXOC2Q96KP1 924 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 TEKT5Q96M29 485 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 VAT1Q99536 393 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 ZDHHC4Q9NPG8 344 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 SEPT3Q9UH03 358 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 RSPH14Q9UHP6 348 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 DMGDHQ9UI17 866 aaKnown RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 TRHDEQ9UKU6 1024 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 CA14Q9ULX7 337 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 DUSP12Q9UNI6 340 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 SNX24Q9Y343 169 aa19.37■□□□□ 0.69
SMPD1-205ENST00000531303 UTP11Q9Y3A2 253 aaKnown RBP19.37■□□□□ 0.69
SMPD1-205ENST00000531303 METTL18O95568 372 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 DLDP09622 509 aaKnown RBP19.36■□□□□ 0.69
SMPD1-205ENST00000531303 NFKB1P19838 968 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 CD68P34810 354 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-205ENST00000531303 SEC13P55735 322 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 GEMIN4P57678 1058 aaKnown RBP19.36■□□□□ 0.69
SMPD1-205ENST00000531303 RHOAP61586 193 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 GUCY2DQ02846 1103 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 RFTN1Q14699 578 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-205ENST00000531303 NAA30Q147X3 362 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-205ENST00000531303 ERCC6LQ2NKX8 1250 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 TPRG1Q6ZUI0 275 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 ERP44Q9BS26 406 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 PAK5Q9P286 719 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 PLA2G4CQ9UP65 541 aa19.36■□□□□ 0.69
SMPD1-205ENST00000531303 ESYT3A0FGR9 886 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 MUSKO15146 869 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 TIMM44O43615 452 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 BNIP3LO60238 219 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 GJB3O75712 270 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ASLP04424 464 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 SRCP12931 536 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 CD72P21854 359 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 PSMB4P28070 264 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 BASP1P80723 227 aaKnown RBP19.35■□□□□ 0.69
SMPD1-205ENST00000531303 SLC20A2Q08357 652 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 TRADDQ15628 312 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 FNDC3BQ53EP0 1204 aaKnown RBP19.35■□□□□ 0.69
SMPD1-205ENST00000531303 INO80DQ53TQ3 878 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-205ENST00000531303 EMC10Q5UCC4 262 aa19.35■□□□□ 0.69
SMPD1-205ENST00000531303 ITPRIPL1Q6GPH6 555 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms