RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SCG3Q8WXD2 468 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 ASB12Q8WXK4 309 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 USP28Q96RU2 1077 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 FEM1AQ9BSK4 669 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 PISDQ9UG56 409 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 SLC12A6Q9UHW9 1150 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 ANKRD17O75179 2603 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-207ENST00000529553 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 F5H5T6 163 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 O00370 1275 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 TOR1BO14657 336 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 CASC3O15234 703 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 YY2O15391 372 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 PPP6R2O75170 966 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 GCATO75600 419 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 UTP20O75691 2785 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 GABBR2O75899 941 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 FYNP06241 537 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 CTSLP07711 333 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 HGFP14210 728 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 PFN3P60673 137 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 ZFP36L1Q07352 338 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 SGCGQ13326 291 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 PRRT3Q5FWE3 981 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 RABGAP1LQ5R372 815 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 TMEM164Q5U3C3 297 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 RAP1GAP2Q684P5 730 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 FAM173BQ6P4H8 233 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 ATCAYQ86WG3 371 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 ZFAND4Q86XD8 727 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 ARL10Q8N8L6 244 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 FBXL13Q8NEE6 735 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 OR2A12Q8NGT7 310 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 PPP1R16AQ96I34 528 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 CATSPER2Q96P56 530 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 C1QTNF2Q9BXJ5 285 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 BLZF1Q9H2G9 400 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 RAB20Q9NX57 234 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 HS3ST2Q9Y278 367 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 OR51B4Q9Y5P0 310 aa11.9□□□□□ -0.5
AMBRA1-207ENST00000529553 PRAMEF33A0A0G2JMD5 474 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 KCNU1A8MYU2 1149 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 M0QYT0 321 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 SPINT1O43278 529 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 AP1G1O43747 822 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 PRAMEF10O60809 474 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 MOCS2O96007 188 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 CASP1P29466 404 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 PSMC2P35998 433 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 YWHAEP62258 255 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 CCL7P80098 99 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 CUL4BQ13620 913 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 FGL2Q14314 439 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 PMF1Q6P1K2 205 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 CHSY1Q86X52 802 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 ATP6V0D2Q8N8Y2 350 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 LINC00301Q8NCQ3 95 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 SEMA4DQ92854 862 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 USP7Q93009 1102 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 MIB2Q96AX9 1013 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 CMKLR1Q99788 373 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 PRMT1Q99873 361 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 SLC13A1Q9BZW2 595 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 LRRN3Q9H3W5 708 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 SYNDIG1Q9H7V2 258 aa11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.89□□□□□ -0.517e-8■□□□□ 8.2
AMBRA1-207ENST00000529553 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 XPO7Q9UIA9 1087 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-207ENST00000529553 A0A1W2PQM1 296 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 C9orf172C9J069 976 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 SPTLC2O15270 562 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 RAD51BO15315 384 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 POLR2DO15514 142 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 STX10O60499 249 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 RPLP0P05388 317 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 CD19P15391 556 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 RECQLP46063 649 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 CLCN6P51797 869 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 NEK3P51956 506 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 YPEL5P62699 121 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 KRT83P78385 493 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 MTA1Q13330 715 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 STILQ15468 1287 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 CNGA2Q16280 664 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 ZC3H12AQ5D1E8 599 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 FAM186BQ8IYM0 893 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 FSTL5Q8N475 847 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 DENND6BQ8NEG7 585 aa11.88□□□□□ -0.51
AMBRA1-207ENST00000529553 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms