RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3DA0A087WVF3 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3IA0A087WXS9 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3EA0A087X179 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3KA0A087X1G2 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 A0A1W2PQJ5 194 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3FA6NER0 549 aaPredicted RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 C10orf142B7Z368 130 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3LB9A6J9 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 SMAD6O43541 496 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 RTN2O75298 545 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 FTLP02792 175 aaPredicted RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 PRNPP04156 253 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3HP0C7X1 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 CHRNA3P32297 505 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 PBX1P40424 430 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 SERPINH1P50454 418 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 METAP1P53582 386 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 GEMIN4P57678 1058 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 RACK1P63244 317 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 BNC1Q01954 994 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 HNRNPDQ14103 355 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3GQ6DHY5 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3CQ6IPX1 549 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 PLEKHA7Q6IQ23 1121 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 UNQ6494/PRO21346Q6UXR6 183 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TBC1D3Q8IZP1 549 aaPredicted RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 TMIEQ8NEW7 156 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 SKA1Q96BD8 255 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 TRIM11Q96F44 468 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 CAMK1GQ96NX5 476 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 EPAS1Q99814 870 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 ACE2Q9BYF1 805 aaPredicted RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 MAGEB5Q9BZ81 275 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 GAREM1Q9H706 876 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 DNAI1Q9UI46 699 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 ZMIZ1Q9ULJ6 1067 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 NEU3Q9UQ49 428 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 ANKRD6Q9Y2G4 727 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 BZW2Q9Y6E2 419 aaKnown RBP13.36□□□□□ -0.27
SSH3-206ENST00000529224 SLCO1B1Q9Y6L6 691 aa13.36□□□□□ -0.27
SSH3-206ENST00000529224 PTPRBP23467 1997 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 PLK4O00444 970 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 KPNA3O00505 521 aaPredicted RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 DDX3XO00571 662 aaKnown RBP eCLIP13.35□□□□□ -0.27
SSH3-206ENST00000529224 ATMINO43313 823 aaPredicted RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 RAMP2O60895 175 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 CTSLP07711 333 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 MYBL1P10243 752 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 SKILP12757 684 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 PSMA2P25787 234 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 EPHB2P29323 1055 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 HTR7P34969 479 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 NUDT1P36639 197 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 ACVRL1P37023 503 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 SIM1P81133 766 aaPredicted RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 ARF5P84085 180 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 OGDHQ02218 1023 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 CNTN1Q12860 1018 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 HLA-BQ31612 363 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 POM121L1PQ3SYA9 428 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 AGBL4Q5VU57 503 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 PRPF39Q86UA1 669 aaKnown RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 VPS36Q86VN1 386 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 PYROXD2Q8N2H3 581 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 RTL3Q8N8U3 475 aaKnown RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 FNIP1Q8TF40 1166 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 SYN2Q92777 582 aaPredicted RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 ISG20Q96AZ6 181 aaKnown RBP13.35□□□□□ -0.27
SSH3-206ENST00000529224 TNKS2Q9H2K2 1166 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 CATSPERBQ9H7T0 1116 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 PREBQ9HCU5 417 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 DYRK4Q9NR20 520 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 NDFIP2Q9NV92 336 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 DONSONQ9NYP3 566 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 IL36AQ9UHA7 158 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 SCINQ9Y6U3 715 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 LRRK1Q38SD2 2015 aa13.35□□□□□ -0.27
SSH3-206ENST00000529224 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
SSH3-206ENST00000529224 VILLO15195 856 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 LATO43561 262 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 HYAL3O43820 417 aaPredicted RBP13.34□□□□□ -0.27
SSH3-206ENST00000529224 CREB3O43889 395 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 DFNA5O60443 496 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 RNF8O76064 485 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 TPM3P06753 285 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 DNA2P51530 1060 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 C21orf59P57076 290 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 ZBED6P86452 979 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms