RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SLC35F3Q8IY50 421 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 ATP6V0D2Q8N8Y2 350 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 GRAMD1AQ96CP6 724 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 SGF29Q96ES7 293 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 PPP1R13BQ96KQ4 1090 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 PSMB7Q99436 277 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 SLC17A9Q9BYT1 436 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 VANGL2Q9ULK5 521 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 PNMA8BQ9ULN7 279 aaPredicted RBP19.42■□□□□ 0.7
SSRP1-204ENST00000529002 HS3ST3A1Q9Y663 406 aa19.42■□□□□ 0.7
SSRP1-204ENST00000529002 FLNCQ14315 2725 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 CETN3O15182 167 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 ENDOD1O94919 500 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 GJB6O95452 261 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 F13A1P00488 732 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 ITGA2BP08514 1039 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 GPD2P43304 727 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 CYP4F2P78329 520 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 EIF4EBP2Q13542 120 aaPredicted RBP19.41■□□□□ 0.7
SSRP1-204ENST00000529002 PDE1CQ14123 709 aaPredicted RBP19.41■□□□□ 0.7
SSRP1-204ENST00000529002 EDRF1Q3B7T1 1238 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 DENND1BQ6P3S1 775 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 LINGO4Q6UY18 593 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 KYAT3Q6YP21 454 aaKnown RBP19.41■□□□□ 0.7
SSRP1-204ENST00000529002 ZNF574Q6ZN55 896 aaPredicted RBP19.41■□□□□ 0.7
SSRP1-204ENST00000529002 ERN2Q76MJ5 926 aaKnown RBP19.41■□□□□ 0.7
SSRP1-204ENST00000529002 VASH2Q86V25 355 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 IL12RB2Q99665 862 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 CCDC3Q9BQI4 270 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 TNKS2Q9H2K2 1166 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 IPO11Q9UI26 975 aaKnown RBP19.41■□□□□ 0.7
SSRP1-204ENST00000529002 SALL4Q9UJQ4 1053 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 CSNK1G3Q9Y6M4 447 aa19.41■□□□□ 0.7
SSRP1-204ENST00000529002 H3BM21 787 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 TCEA3O75764 348 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 WT1P19544 449 aaPredicted RBP19.4■□□□□ 0.7
SSRP1-204ENST00000529002 TBXAS1P24557 533 aaPredicted RBP19.4■□□□□ 0.7
SSRP1-204ENST00000529002 RPL34P49207 117 aaKnown RBP19.4■□□□□ 0.7
SSRP1-204ENST00000529002 AUHQ13825 339 aaKnown RBP19.4■□□□□ 0.7
SSRP1-204ENST00000529002 SPIDRQ14159 915 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 RABGAP1LQ5R372 815 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 ATP11CQ8NB49 1132 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 TMIEQ8NEW7 156 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 TPCN2Q8NHX9 752 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 RNF34Q969K3 372 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 CCDC47Q96A33 483 aaKnown RBP19.4■□□□□ 0.7
SSRP1-204ENST00000529002 BOCQ9BWV1 1114 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 FOXP3Q9BZS1 431 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 EPB41L5Q9HCM4 733 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 DYRK4Q9NR20 520 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 RABGEF1Q9UJ41 708 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 HPSEQ9Y251 543 aa19.4■□□□□ 0.7
SSRP1-204ENST00000529002 PLD2O14939 933 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 CNTN5O94779 1100 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 MYL1P05976 194 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 ZSCAN22P10073 491 aaPredicted RBP19.39■□□□□ 0.69
SSRP1-204ENST00000529002 UGT1A5P35504 534 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 ADKP55263 362 aaKnown RBP19.39■□□□□ 0.69
SSRP1-204ENST00000529002 TLE1Q04724 770 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 PKP1Q13835 747 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 RRAGAQ7L523 313 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 DCP2Q8IU60 420 aaKnown RBP19.39■□□□□ 0.69
SSRP1-204ENST00000529002 PPM1KQ8N3J5 372 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 FBXO39Q8N4B4 442 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 SLC35C1Q96A29 364 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 KLF6Q99612 283 aaPredicted RBP19.39■□□□□ 0.69
SSRP1-204ENST00000529002 MUC3BQ9H195 1237 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 FAM204AQ9H8W3 233 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.39■□□□□ 0.69
SSRP1-204ENST00000529002 VPS51Q9UID3 782 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 HS3ST2Q9Y278 367 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 DOCK4Q8N1I0 1966 aa19.39■□□□□ 0.69
SSRP1-204ENST00000529002 E5RJQ4 531 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 LEFTY1O75610 366 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 CELA2BP08218 269 aaPredicted RBP19.38■□□□□ 0.69
SSRP1-204ENST00000529002 NDUFA8P51970 172 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 OXCT1P55809 520 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 TCEA2Q15560 299 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 TBR1Q16650 682 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 PRRT3Q5FWE3 981 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 TTC39BQ5VTQ0 682 aaPredicted RBP19.38■□□□□ 0.69
SSRP1-204ENST00000529002 DPY19L3Q6ZPD9 716 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 HDAC8Q9BY41 377 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 POPDC2Q9HBU9 364 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 USP25Q9UHP3 1055 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 SLC12A6Q9UHW9 1150 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 GGT7Q9UJ14 662 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 FARP1Q9Y4F1 1045 aaPredicted RBP19.38■□□□□ 0.69
SSRP1-204ENST00000529002 SNX10Q9Y5X0 201 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 HS3ST4Q9Y661 456 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 WASF2Q9Y6W5 498 aa19.38■□□□□ 0.69
SSRP1-204ENST00000529002 LRRK1Q38SD2 2015 aa19.37■□□□□ 0.69
SSRP1-204ENST00000529002 K7ELQ4 463 aaPredicted RBP19.37■□□□□ 0.69
SSRP1-204ENST00000529002 NTN3O00634 580 aaPredicted RBP19.37■□□□□ 0.69
SSRP1-204ENST00000529002 TPP1O14773 563 aa19.37■□□□□ 0.69
SSRP1-204ENST00000529002 AFPP02771 609 aaKnown RBP19.37■□□□□ 0.69
SSRP1-204ENST00000529002 PRNPP04156 253 aa19.37■□□□□ 0.69
SSRP1-204ENST00000529002 CMA1P23946 247 aa19.37■□□□□ 0.69
SSRP1-204ENST00000529002 MLLT3P42568 568 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms