RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 PRPSAP1Q14558 356 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 LONRF1Q17RB8 773 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 RARS2Q5T160 578 aaKnown RBP20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 TMCO4Q5TGY1 634 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 ZNF783Q6ZMS7 281 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 PRPF39Q86UA1 669 aaKnown RBP20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 ARID3BQ8IVW6 561 aaPredicted RBP20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 GOLGA6L1Q8N7Z2 621 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 LRRC39Q96DD0 335 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 ALG14Q96F25 216 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 ZNF599Q96NL3 588 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 TRIM56Q9BRZ2 755 aaKnown RBP20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 ATP13A1Q9HD20 1204 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 CASS4Q9NQ75 786 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 PLK2Q9NYY3 685 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 C5orf42Q9H799 3197 aa20.21■□□□□ 0.83
PPP1CA-204ENST00000526510 TTC24A2A3L6 582 aaPredicted RBP20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 TYW5A2RUC4 315 aaKnown RBP20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 SMIM23A6NLE4 172 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 MUSKO15146 869 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 MMP2P08253 660 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 TCF3P15923 654 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 TSHRP16473 764 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 MGAT1P26572 445 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 SLCO1A2P46721 670 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 SESN2P58004 480 aaPredicted RBP20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 CRADDP78560 199 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 MPPE1Q53F39 396 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 TCEAL5Q5H9L2 206 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 KCTD16Q68DU8 428 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 C3orf62Q6ZUJ4 267 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 PALM2Q8IXS6 379 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 IMP4Q96G21 291 aaKnown RBP20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 EBNA1BP2Q99848 306 aaKnown RBP20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 APOL2Q9BQE5 337 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 APOL5Q9BWW9 433 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 MUC3BQ9H195 1237 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 SLC25A51Q9H1U9 297 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 LRRC40Q9H9A6 602 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 DZANK1Q9NVP4 752 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 RABGEF1Q9UJ41 708 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 ZMYM5Q9UJ78 669 aa20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 KIF26AQ9ULI4 1882 aaPredicted RBP20.2■□□□□ 0.82
PPP1CA-204ENST00000526510 TLDC2A0PJX2 215 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 RASGRF2O14827 1237 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 TCEA3O75764 348 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ZMPSTE24O75844 475 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ANXA9O76027 345 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 NEBLO76041 1014 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 GCAP28676 217 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 STAT4Q14765 748 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 MPP7Q5T2T1 576 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 FYB2Q5VWT5 728 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 TMEM184AQ6ZMB5 413 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ARRDC2Q8TBH0 407 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 CFAP36Q96G28 342 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ATP6V1G3Q96LB4 118 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 LRRC3BQ96PB8 259 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 FEM1AQ9BSK4 669 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ROPN1BQ9BZX4 212 aaPredicted RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 PRO3102Q9H379 93 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 CENPHQ9H3R5 247 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ROPN1Q9HAT0 212 aaPredicted RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 AAR2Q9Y312 384 aaKnown RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 PRRC2BQ5JSZ5 2229 aaKnown RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 CBX4O00257 560 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 PSMD3O43242 534 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 SNAP91O60641 907 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 GJB3O75712 270 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 CD160O95971 181 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ADRA1AP35348 466 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 CSKP41240 450 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 GEMP55040 296 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ARF5P84085 180 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 DSC2Q02487 901 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 CDH18Q13634 790 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 KDELC1Q6UW63 502 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 MFN1Q8IWA4 741 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 SH2D3CQ8N5H7 860 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 FBF1Q8TES7 1133 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 MRGPRX2Q96LB1 330 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 LINC00597Q9H2U6 94 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 NSUN3Q9H649 340 aaKnown RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 SYBUQ9NX95 663 aa20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 UBA2Q9UBT2 640 aaPredicted RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 ZC3H7BQ9UGR2 993 aaKnown RBP20.19■□□□□ 0.82
PPP1CA-204ENST00000526510 GOLGA6L10A6NI86 522 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 SDR42E2A6NKP2 422 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 POLR3GO15318 223 aaPredicted RBP20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 CPP00450 1065 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 AGTP01019 485 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 CBX1P83916 185 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 ITKQ08881 620 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 EFTUD2Q15029 972 aaKnown RBP eCLIP20.18■□□□□ 0.822e-7■■■■■ 31.4
PPP1CA-204ENST00000526510 SYCE2Q6PIF2 218 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 UNC5AQ6ZN44 842 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 TMEM25Q86YD3 366 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 IPMKQ8NFU5 416 aa20.18■□□□□ 0.82
PPP1CA-204ENST00000526510 TADA1Q96BN2 335 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms