RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 NAF1Q96HR8 494 aaKnown RBP24.5■■□□□ 1.51
USP47-205ENST00000525257 NPY6RQ99463 290 aa24.5■■□□□ 1.51
USP47-205ENST00000525257 WDCPQ9H6R7 721 aa24.5■■□□□ 1.51
USP47-205ENST00000525257 ARHGEF38Q9NXL2 777 aa24.5■■□□□ 1.51
USP47-205ENST00000525257 AJAP1Q9UKB5 411 aaPredicted RBP24.5■■□□□ 1.51
USP47-205ENST00000525257 TEX51A0A1B0GUA7 166 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 ENDOD1O94919 500 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 MPOP05164 745 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 ALPPL2P10696 532 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 KRT9P35527 623 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 CXCR3P49682 368 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 SULT1E1P49888 294 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 SNX16P57768 344 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 RNASE9P60153 205 aaKnown RBP24.49■■□□□ 1.51
USP47-205ENST00000525257 PTK2Q05397 1052 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 EXOC3L4Q17RC7 722 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 BRMS1LQ5PSV4 323 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 PTAR1Q7Z6K3 402 aaPredicted RBP24.49■■□□□ 1.51
USP47-205ENST00000525257 ZNF683Q8IZ20 524 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 ZNF397Q8NF99 534 aaPredicted RBP24.49■■□□□ 1.51
USP47-205ENST00000525257 APOLD1Q96LR9 279 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 DNAJC28Q9NX36 388 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 MPP6Q9NZW5 540 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 IL36AQ9UHA7 158 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 ZNF462Q96JM2 2506 aa24.49■■□□□ 1.51
USP47-205ENST00000525257 PNMA6AP0CW24 399 aaPredicted RBP24.48■■□□□ 1.51
USP47-205ENST00000525257 RECQLP46063 649 aaPredicted RBP24.48■■□□□ 1.51
USP47-205ENST00000525257 CLCN6P51797 869 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 ATMQ13315 3056 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 TMEM259Q4ZIN3 620 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 CDCP2Q5VXM1 449 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 Q6ZSR6 202 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 ABI3BPQ7Z7G0 1075 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 SETD3Q86TU7 594 aaPredicted RBP24.48■■□□□ 1.51
USP47-205ENST00000525257 SLC47A2Q86VL8 602 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 LSM14AQ8ND56 463 aaKnown RBP24.48■■□□□ 1.51
USP47-205ENST00000525257 OR7D4Q8NG98 312 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 DEPDC7Q96QD5 511 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 HDAC8Q9BY41 377 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 TMPRSS4Q9NRS4 437 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 RRN3Q9NYV6 651 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.48■■□□□ 1.51
USP47-205ENST00000525257 NLGN3Q9NZ94 848 aa24.48■■□□□ 1.51
USP47-205ENST00000525257 TRPM6Q9BX84 2022 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 FAM170AA1A519 330 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 A6NNZ2 444 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 LEFTY1O75610 366 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 NEBLO76041 1014 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 PON1P27169 355 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 PCBP4P57723 403 aaKnown RBP24.47■■□□□ 1.51
USP47-205ENST00000525257 GABREP78334 506 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 DEUP1Q05D60 604 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 MAPK8IP2Q13387 824 aaPredicted RBP24.47■■□□□ 1.51
USP47-205ENST00000525257 LRRC31Q6UY01 552 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 DPY19L3Q6ZPD9 716 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 ZNF248Q8NDW4 579 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 PPP1R16AQ96I34 528 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 OSBPL2Q9H1P3 480 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 STAP1Q9ULZ2 295 aa24.47■■□□□ 1.51
USP47-205ENST00000525257 ASH1LQ9NR48 2969 aaKnown RBP24.47■■□□□ 1.51
USP47-205ENST00000525257 LY6G6EA0A0G2JKS1 128 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 DRGXA6NNA5 263 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 USP12O75317 370 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 CSO75390 466 aaKnown RBP24.46■■□□□ 1.51
USP47-205ENST00000525257 OR1E1P30953 314 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 NEK3P51956 506 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 IFT43Q96FT9 208 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 ZNF578Q96N58 590 aaPredicted RBP24.46■■□□□ 1.51
USP47-205ENST00000525257 TBCBQ99426 244 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 SPON2Q9BUD6 331 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 WASF2Q9Y6W5 498 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 U3KQA8 63 aa24.46■■□□□ 1.51
USP47-205ENST00000525257 NEMP2A6NFY4 417 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 K7ESM1 405 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 SCAMP1O15126 338 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 GADD45BO75293 160 aaPredicted RBP24.45■■□□□ 1.5
USP47-205ENST00000525257 CLCN1P35523 988 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 HNRNPKP61978 463 aaKnown RBP eCLIP24.45■■□□□ 1.5
USP47-205ENST00000525257 ZDHHC17Q8IUH5 632 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 ZNF843Q8N446 348 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 BMFQ96LC9 184 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 SLC17A9Q9BYT1 436 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 ABCG4Q9H172 646 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 SIX2Q9NPC8 291 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 RWDD2AQ9UIY3 292 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 DNAJC12Q9UKB3 198 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 PAXBP1Q9Y5B6 917 aa24.45■■□□□ 1.5
USP47-205ENST00000525257 DOCK4Q8N1I0 1966 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 POM121BA6NF01 834 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 FOXN3O00409 490 aaPredicted RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 SRGAP2O75044 1071 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 ZNF821O75541 412 aaPredicted RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 GP1BAP07359 652 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 ADRB3P13945 408 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 DUSP3P51452 185 aaPredicted RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 DNA2P51530 1060 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 RPS21P63220 83 aaKnown RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 FGL2Q14314 439 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 FZD2Q14332 565 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 KIAA1161Q6NSJ0 714 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms