RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 NEK5Q6P3R8 708 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 ARCQ7LC44 396 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 PHLDB2Q86SQ0 1253 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 GRIN3AQ8TCU5 1115 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 KLHDC7BQ96G42 594 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 CCDC114Q96M63 670 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 SPON2Q9BUD6 331 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 ZYG11BQ9C0D3 744 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 FZD3Q9NPG1 666 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 METTL5Q9NRN9 209 aaKnown RBP19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 TMEM51Q9NW97 253 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 IL36AQ9UHA7 158 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 ACTL7AQ9Y615 435 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 WASF2Q9Y6W5 498 aa19.2■□□□□ 0.66
PTP4A3-206ENST00000524028 ATRXP46100 2492 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 ADAMTS20P59510 1910 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 GOLGA4Q13439 2230 aaKnown RBP19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 LEFTY1O75610 366 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 CD160O95971 181 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 PRNPP04156 253 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 JUPP14923 745 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 CHRNB2P17787 502 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 ARF5P84085 180 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 ATP11AP98196 1134 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 COL9A2Q14055 689 aaPredicted RBP19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 SEL1L3Q68CR1 1132 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 FBXL19Q6PCT2 694 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 ERN2Q76MJ5 926 aaKnown RBP19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 PDZD3Q86UT5 571 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 HORMAD1Q86X24 394 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 SLC25A45Q8N413 288 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 HDAC8Q9BY41 377 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 MAGEB5Q9BZ81 275 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 ATP13A1Q9HD20 1204 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 ACACAQ13085 2346 aa19.19■□□□□ 0.66
PTP4A3-206ENST00000524028 TRIM38O00635 465 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 EPHB6O15197 1021 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 GFPT2O94808 682 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 CYP1A1P04798 512 aaPredicted RBP19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 THEGLP0DJG4 465 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 CKMT2P17540 419 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 SERPINH1P50454 418 aaKnown RBP19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 CLDN2P57739 230 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 FMO1Q01740 532 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 GNA12Q03113 381 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 TARDBPQ13148 414 aaKnown RBP eCLIP19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 C15orf59Q2T9L4 293 aaPredicted RBP19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 PROX2Q3B8N5 592 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 CCDC14Q49A88 953 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 HES3Q5TGS1 186 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 ZNF783Q6ZMS7 281 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 DRC7Q8IY82 874 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 MSANTD4Q8NCY6 345 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 OR13H1Q8NG92 308 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 VPS16Q9H269 839 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 SCUBE2Q9NQ36 999 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 DYRK4Q9NR20 520 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 NDFIP2Q9NV92 336 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 UCKL1Q9NWZ5 548 aa19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 PPARGC1AQ9UBK2 798 aaKnown RBP19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 FCF1Q9Y324 198 aaKnown RBP19.18■□□□□ 0.66
PTP4A3-206ENST00000524028 SIGLEC6O43699 453 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 PCDH8O95206 1070 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 GJB6O95452 261 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 CDK4P11802 303 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 MMP8P22894 467 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 ACVRL1P37023 503 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 CDR2Q01850 454 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 TMEM259Q4ZIN3 620 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 CT47A1Q5JQC4 288 aaPredicted RBP19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 MANEALQ5VSG8 457 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 RETSATQ6NUM9 610 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 GCNT7Q6ZNI0 430 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 JOSD2Q8TAC2 188 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 RXFP2Q8WXD0 754 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 CEP44Q9C0F1 390 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 KLHL11Q9NVR0 708 aa19.17■□□□□ 0.66
PTP4A3-206ENST00000524028 DOCK9Q9BZ29 2069 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 A0A087WV48 116 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 FAM72CH0Y354 149 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 HNRNPA2B1P22626 353 aaKnown RBP19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 DGKAP23743 735 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 AKT2P31751 481 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 ADRA1BP35368 520 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 HNF1BP35680 557 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 RECQLP46063 649 aaPredicted RBP19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 DNA2P51530 1060 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 JAM2P57087 298 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 POLR2FP61218 127 aaKnown RBP19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 SLC20A2Q08357 652 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 CCDC15Q0P6D6 951 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 FGL2Q14314 439 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 KRT31Q15323 416 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 CDO1Q16878 200 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 CARD16Q5EG05 197 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 FAM72AQ5TYM5 149 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 FAM72DQ6L9T8 149 aa19.16■□□□□ 0.66
PTP4A3-206ENST00000524028 NLRP14Q86W24 1093 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms