RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.32□□□□□ -1.56
SKP1-211ENST00000523359 LMAN2LQ9H0V9 348 aa5.32□□□□□ -1.56
SKP1-211ENST00000523359 AAMDCQ9H7C9 122 aa5.32□□□□□ -1.56
SKP1-211ENST00000523359 TTC12Q9H892 705 aaPredicted RBP5.32□□□□□ -1.56
SKP1-211ENST00000523359 PAPOLBQ9NRJ5 636 aaKnown RBP5.32□□□□□ -1.56
SKP1-211ENST00000523359 CNOT7Q9UIV1 285 aaKnown RBP5.32□□□□□ -1.56
SKP1-211ENST00000523359 ODF2LQ9ULJ1 636 aa5.32□□□□□ -1.56
SKP1-211ENST00000523359 ICKQ9UPZ9 632 aa5.32□□□□□ -1.56
SKP1-211ENST00000523359 A6NCN8 305 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 OR6C68A6NDL8 312 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 E5RJQ4 531 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 HBP1O60381 514 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 TULP3O75386 442 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 CBX6O95503 412 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 CYP19A1P11511 503 aaPredicted RBP5.31□□□□□ -1.56
SKP1-211ENST00000523359 TNFAIP3P21580 790 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 KELP23276 732 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 GGT5P36269 586 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 RPP30P78346 268 aaKnown RBP5.31□□□□□ -1.56
SKP1-211ENST00000523359 PMPCAQ10713 525 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 SRSF7Q16629 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
SKP1-211ENST00000523359 Q4G0T1 1027 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 FBXO43Q4G163 708 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 MIDNQ504T8 468 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 EPHA10Q5JZY3 1008 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 VWA5B1Q5TIE3 1220 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 DDIASQ8IXT1 998 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 RFWD2Q8NHY2 731 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 CUL5Q93034 780 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 EME1Q96AY2 570 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 SH3KBP1Q96B97 665 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 CDHR1Q96JP9 859 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 IFT27Q9BW83 186 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 AGXT2Q9BYV1 514 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 SLC29A3Q9BZD2 475 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 TTYH1Q9H313 450 aaPredicted RBP5.31□□□□□ -1.56
SKP1-211ENST00000523359 HIPK3Q9H422 1215 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 NRIP3Q9NQ35 241 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 DHDHQ9UQ10 334 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 TMEM98Q9Y2Y6 226 aa5.31□□□□□ -1.56
SKP1-211ENST00000523359 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 TRBV5-3A0A0A0MS03 114 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 TARSL2A2RTX5 802 aaKnown RBP5.3□□□□□ -1.56
SKP1-211ENST00000523359 TMEM247A6NEH6 219 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 FOXO6A8MYZ6 492 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 K7ENM7 598 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 PER2O15055 1255 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 GUCY1B2O75343 617 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 BAIAP3O94812 1187 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 ZBED6P86452 979 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 NUCB1Q02818 461 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 PDE1CQ14123 709 aaPredicted RBP5.3□□□□□ -1.56
SKP1-211ENST00000523359 SLC18A3Q16572 532 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 B4GALNT4Q76KP1 1039 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 MON1AQ86VX9 555 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 OR8H2Q8N162 312 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 CNOT9Q92600 299 aaKnown RBP5.3□□□□□ -1.56
SKP1-211ENST00000523359 ZUFSPQ96AP4 578 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 ZNF419Q96HQ0 510 aaPredicted RBP5.3□□□□□ -1.56
SKP1-211ENST00000523359 APOPT1Q96IL0 206 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 FRG2BQ96QU4 278 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 EYA3Q99504 573 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 FUZQ9BT04 418 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 TUBB6Q9BUF5 446 aa5.3□□□□□ -1.56
SKP1-211ENST00000523359 INTS2Q9H0H0 1204 aaKnown RBP5.3□□□□□ -1.56
SKP1-211ENST00000523359 COL3A1P02461 1466 aaPredicted RBP5.3□□□□□ -1.56
SKP1-211ENST00000523359 ITIH6Q6UXX5 1313 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ZNF335Q9H4Z2 1342 aaPredicted RBP5.29□□□□□ -1.56
SKP1-211ENST00000523359 KIR2DS5A0A0G2JLQ3 304 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 KIR2DS3K7RE56 304 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
SKP1-211ENST00000523359 TLR2O60603 784 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 DDAH2O95865 285 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 IGHDP01880 384 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 PSMA3P25788 255 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ABCD3P28288 659 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 HOXC13P31276 330 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 KRT9P35527 623 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 SKIV2L2P42285 1042 aaKnown RBP5.29□□□□□ -1.56
SKP1-211ENST00000523359 GPD2P43304 727 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 CDH15P55291 814 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 NEXNQ0ZGT2 675 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 EZH2Q15910 746 aaKnown RBP5.29□□□□□ -1.56
SKP1-211ENST00000523359 BAK1Q16611 211 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ALG10Q5BKT4 473 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 MTX3Q5HYI7 312 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ALG10BQ5I7T1 473 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ENTPD8Q5MY95 495 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 TTC39AQ5SRH9 613 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 ISM2Q6H9L7 571 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 AAGABQ6PD74 315 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 DEF8Q6ZN54 512 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 CHCHD4Q8N4Q1 142 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 PRSS3P2Q8NHM4 247 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 FAR1Q8WVX9 515 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 RAB40AQ8WXH6 277 aa5.29□□□□□ -1.56
SKP1-211ENST00000523359 HSPH1Q92598 858 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms