RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 HNRNPDLO14979 420 aaKnown RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 OGTO15294 1046 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 HOXC11O43248 304 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 RASGRP1O95267 797 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 KRT1P04264 644 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 C6P13671 934 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 PSMA5P28066 241 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 IL12RB1P42701 662 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 GRK6P43250 576 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 CSNK1EP49674 416 aaKnown RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 LIG4P49917 911 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 TARDBPQ13148 414 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 RTP5Q14D33 572 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 NFE2Q16621 373 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 KIF19Q2TAC6 998 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 FUT11Q495W5 492 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 CFAP221Q4G0U5 840 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 KCNT1Q5JUK3 1230 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 HES3Q5TGS1 186 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 RINT1Q6NUQ1 792 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 SLC39A4Q6P5W5 647 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 IL27RAQ6UWB1 636 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 SYDE1Q6ZW31 735 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 C1orf186Q6ZWK4 172 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 USP49Q70CQ1 688 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 OSTM1Q86WC4 334 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 TMPRSS12Q86WS5 348 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 FSIP1Q8NA03 581 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 WBP2Q969T9 261 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 NAF1Q96HR8 494 aaKnown RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 KCNJ15Q99712 375 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 GABRG3Q99928 467 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 SLC6A20Q9NP91 592 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 DDX43Q9NXZ2 648 aaKnown RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 WSB2Q9NYS7 404 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 FTSJ1Q9UET6 329 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 EIF2B4Q9UI10 523 aaKnown RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 CPSF3Q9UKF6 684 aaKnown RBP6.7□□□□□ -1.34
VPS13B-211ENST00000522802 PLA2G2DQ9UNK4 145 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 NFE2L3Q9Y4A8 694 aa6.7□□□□□ -1.34
VPS13B-211ENST00000522802 TLN1Q9Y490 2541 aaKnown RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 A0A0B4J269 797 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 ZNF840PA6NDX5 716 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 SLC9A3R1O14745 358 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 ATP2C2O75185 946 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 MUTP22033 750 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 PAX3P23760 479 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 HSD3B2P26439 372 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 CDC25AP30304 524 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 HNF1BP35680 557 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 ACOT2P49753 483 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 CSRP3P50461 194 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 PDE6CP51160 858 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 PSMC1P62191 440 aaKnown RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 DLG4P78352 724 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 GAD2Q05329 585 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 DNAJC3Q13217 504 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 ZNF174Q15697 407 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 ANO4Q32M45 955 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 COLEC12Q5KU26 742 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 ARHGAP40Q5TG30 622 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 MILR1Q7Z6M3 343 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 TMEM25Q86YD3 366 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 SPATA2LQ8IUW3 424 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 BBS7Q8IWZ6 715 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 BHLHE22Q8NFJ8 381 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 SNX19Q92543 992 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 MYLPFQ96A32 169 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 TMEM176AQ96HP8 235 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 NTPCRQ9BSD7 190 aaKnown RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 MSTO1Q9BUK6 570 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 SGPP1Q9BX95 441 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 IKZF4Q9H2S9 585 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 C17orf75Q9HAS0 396 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 TMEM30AQ9NV96 361 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 DNAJC17Q9NVM6 304 aaKnown RBP6.69□□□□□ -1.34
VPS13B-211ENST00000522802 DPP3Q9NY33 737 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 DEC1Q9P2X7 70 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 DERAQ9Y315 318 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 PCDHA5Q9Y5H7 936 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 CYP46A1Q9Y6A2 500 aa6.69□□□□□ -1.34
VPS13B-211ENST00000522802 NOTCH2Q04721 2471 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 E2F8A0AVK6 867 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 NEDD8-MDP1E9PL57 170 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 ETV2O00321 342 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 KRIT1O00522 736 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 PCDHGA12O60330 932 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 JAK2O60674 1132 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 PFKFB2O60825 505 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 DNAJC8O75937 253 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 PIGRP01833 764 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 MED14OSP0DP75 135 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 IRF1P10914 325 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 MBL2P11226 248 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-211ENST00000522802 COL6A2P12110 1019 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 JUPP14923 745 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 PFKLP17858 780 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 GLDCP23378 1020 aa6.68□□□□□ -1.34
VPS13B-211ENST00000522802 MAGEA11P43364 429 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms