RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	GOLGA8F	Q08AF8	430 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115		Q0VFX4	171 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	ERV3-1	Q14264	604 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	GPR18	Q14330	331 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	ANKRD1	Q15327	319 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	HEPHL1	Q6MZM0	1159 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	CTU1	Q7Z7A3	348 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	SUGP1	Q8IWZ8	645 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	ANKRD44	Q8N8A2	993 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	CLEC18C	Q8NCF0	446 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	SETD9	Q8NE22	299 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	TMEM204	Q9BSN7	226 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	NOD2	Q9HC29	1040 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	NCKIPSD	Q9NZQ3	722 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	SELENON	Q9NZV5	590 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	DHDH	Q9UQ10	334 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	RRP7A	Q9Y3A4	280 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	RAP2C	Q9Y3L5	183 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	PCDHGB3	Q9Y5G1	929 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	OR6C75	A6NL08	312 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	MS4A18	H0YCH9	400 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	HSPB6	O14558	160 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	IKBKB	O14920	756 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	DHX16	O60231	1041 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	PIP5K1C	O60331	668 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	HBP1	O60381	514 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	CYP1A2	P05177	515 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	HOXC6	P09630	235 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	YWHAQ	P27348	245 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	ENTPD1	P49961	510 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	PPFIA1	Q13136	1202 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	GPS2	Q13227	327 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	IL13RA2	Q14627	380 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	TAF5	Q15542	800 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	OTUD1	Q5VV17	481 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	LDHAL6A	Q6ZMR3	332 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	C2CD5	Q86YS7	1000 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	IQCF1	Q8N6M8	205 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	HORMAD2	Q8N7B1	307 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	PRR26	Q8N8Z3	221 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	TEX45	Q8NA69	505 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	CEP70	Q8NHQ1	597 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	MIB2	Q96AX9	1013 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	RNFT2	Q96EX2	444 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	RBM17	Q96I25	401 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	DCLK3	Q9C098	648 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	ITM2C	Q9NQX7	267 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	WNT16	Q9UBV4	365 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	GDA	Q9Y2T3	454 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	GPR52	Q9Y2T5	361 aa		4.54	□□□□□ -1.68
PTPN12-215	ENST00000522115	TTC3	P53804	2025 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	BECN2	A8MW95	431 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115		I6L893	689 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	VWA5A	O00534	786 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	RGS14	O43566	566 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	TSPAN3	O60637	253 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	CPA1	P15085	419 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	TKT	P29401	623 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	CCKBR	P32239	447 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	HAL	P42357	657 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	DPP6	P42658	865 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	RFX5	P48382	616 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	TRAF1	Q13077	416 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	AP5B1	Q2VPB7	878 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	UBAP2	Q5T6F2	1119 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	ANKRD45	Q5TZF3	282 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115		Q6ZTK2	550 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	MEPCE	Q7L2J0	689 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	CADM3	Q8N126	398 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	ZMIZ2	Q8NF64	920 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	OR4N2	Q8NGD1	307 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	SLC35F5	Q8WV83	523 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	OIT3	Q8WWZ8	545 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	PHF21B	Q96EK2	531 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	TWNK	Q96RR1	684 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	PYM1	Q9BRP8	204 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	NTPCR	Q9BSD7	190 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	CTDSP1	Q9GZU7	261 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	TLR8	Q9NR97	1041 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	ATP8A2	Q9NTI2	1148 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	CDH22	Q9UJ99	828 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	FZD10	Q9ULW2	581 aa		4.53	□□□□□ -1.68
PTPN12-215	ENST00000522115	VWA3A	A6NCI4	1184 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	INAFM1	C9JVW0	142 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	LDB2	O43679	373 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	CLDN7	O95471	211 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	SERPINC1	P01008	464 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	HSD3B1	P14060	373 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	HOXB6	P17509	224 aa	Known RBP	4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	HOXD3	P31249	432 aa	Predicted RBP	4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	HNF1B	P35680	557 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	MLH1	P40692	756 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	GPR12	P47775	334 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	PPP3CC	P48454	512 aa		4.52	□□□□□ -1.69
PTPN12-215	ENST00000522115	CDH12	P55289	794 aa		4.52	□□□□□ -1.69

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