RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
PTPN12-215ENST00000522115 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
PTPN12-215ENST00000522115 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
PTPN12-215ENST00000522115 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
PTPN12-215ENST00000522115 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
PTPN12-215ENST00000522115 FOXD1Q16676 465 aa19.22■□□□□ 0.67
PTPN12-215ENST00000522115 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
PTPN12-215ENST00000522115 ADRA2BP18089 450 aa18.4■□□□□ 0.54
PTPN12-215ENST00000522115 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
PTPN12-215ENST00000522115 MSH5O43196 834 aa17.8■□□□□ 0.44
PTPN12-215ENST00000522115 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
PTPN12-215ENST00000522115 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
PTPN12-215ENST00000522115 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
PTPN12-215ENST00000522115 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
PTPN12-215ENST00000522115 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
PTPN12-215ENST00000522115 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
PTPN12-215ENST00000522115 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
PTPN12-215ENST00000522115 KCNA4P22459 653 aa16.53■□□□□ 0.24
PTPN12-215ENST00000522115 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
PTPN12-215ENST00000522115 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
PTPN12-215ENST00000522115 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
PTPN12-215ENST00000522115 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
PTPN12-215ENST00000522115 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
PTPN12-215ENST00000522115 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
PTPN12-215ENST00000522115 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
PTPN12-215ENST00000522115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■□□□□ 10.5
PTPN12-215ENST00000522115 FOXD4L1Q9NU39 408 aa15.27■□□□□ 0.04
PTPN12-215ENST00000522115 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
PTPN12-215ENST00000522115 ZBTB22O15209 634 aa15.22■□□□□ 0.03
PTPN12-215ENST00000522115 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
PTPN12-215ENST00000522115 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
PTPN12-215ENST00000522115 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
PTPN12-215ENST00000522115 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
PTPN12-215ENST00000522115 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
PTPN12-215ENST00000522115 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
PTPN12-215ENST00000522115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
PTPN12-215ENST00000522115 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
PTPN12-215ENST00000522115 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
PTPN12-215ENST00000522115 APLP2Q06481 763 aa14.86□□□□□ -0.03
PTPN12-215ENST00000522115 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
PTPN12-215ENST00000522115 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
PTPN12-215ENST00000522115 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
PTPN12-215ENST00000522115 CAPN15O75808 1086 aa14.62□□□□□ -0.07
PTPN12-215ENST00000522115 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
PTPN12-215ENST00000522115 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
PTPN12-215ENST00000522115 DSG3P32926 999 aa14.47□□□□□ -0.09
PTPN12-215ENST00000522115 POLA2Q14181 598 aa14.33□□□□□ -0.12
PTPN12-215ENST00000522115 ABCB7O75027 752 aa14.31□□□□□ -0.12
PTPN12-215ENST00000522115 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
PTPN12-215ENST00000522115 FBLN2P98095 1184 aa14.05□□□□□ -0.16
PTPN12-215ENST00000522115 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
PTPN12-215ENST00000522115 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
PTPN12-215ENST00000522115 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
PTPN12-215ENST00000522115 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
PTPN12-215ENST00000522115 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
PTPN12-215ENST00000522115 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
PTPN12-215ENST00000522115 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
PTPN12-215ENST00000522115 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
PTPN12-215ENST00000522115 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
PTPN12-215ENST00000522115 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
PTPN12-215ENST00000522115 FKBP8Q14318 412 aa13.6□□□□□ -0.23
PTPN12-215ENST00000522115 PROM2Q8N271 834 aa13.55□□□□□ -0.24
PTPN12-215ENST00000522115 POTEHQ6S545 545 aa13.5□□□□□ -0.25
PTPN12-215ENST00000522115 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN12-215ENST00000522115 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
PTPN12-215ENST00000522115 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
PTPN12-215ENST00000522115 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
PTPN12-215ENST00000522115 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
PTPN12-215ENST00000522115 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
PTPN12-215ENST00000522115 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
PTPN12-215ENST00000522115 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
PTPN12-215ENST00000522115 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
PTPN12-215ENST00000522115 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN12-215ENST00000522115 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
PTPN12-215ENST00000522115 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
PTPN12-215ENST00000522115 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
PTPN12-215ENST00000522115 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
PTPN12-215ENST00000522115 MIER1Q8N108 512 aa12.93□□□□□ -0.34
PTPN12-215ENST00000522115 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
PTPN12-215ENST00000522115 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
PTPN12-215ENST00000522115 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
PTPN12-215ENST00000522115 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
PTPN12-215ENST00000522115 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
PTPN12-215ENST00000522115 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
PTPN12-215ENST00000522115 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
PTPN12-215ENST00000522115 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPN12-215ENST00000522115 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
PTPN12-215ENST00000522115 NUBP1P53384 320 aa12.68□□□□□ -0.38
PTPN12-215ENST00000522115 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
PTPN12-215ENST00000522115 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
PTPN12-215ENST00000522115 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
PTPN12-215ENST00000522115 HAX1O00165 279 aa12.58□□□□□ -0.4
PTPN12-215ENST00000522115 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
PTPN12-215ENST00000522115 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
PTPN12-215ENST00000522115 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
PTPN12-215ENST00000522115 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PTPN12-215ENST00000522115 GSE1Q14687 1217 aa12.52□□□□□ -0.41
PTPN12-215ENST00000522115 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
PTPN12-215ENST00000522115 EVX2Q03828 476 aa12.48□□□□□ -0.41
PTPN12-215ENST00000522115 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms