RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 OAS2P29728 719 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CYLC1P35663 651 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 EIF4A3P38919 411 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 KRTAP10-9P60411 292 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 KCNA1Q09470 495 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 EIF3IQ13347 325 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 BMT2Q1RMZ1 405 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 SLC45A4Q5BKX6 768 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 HECTD3Q5T447 861 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 SNX30Q5VWJ9 437 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 FBXO38Q6PIJ6 1188 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF662Q6ZS27 426 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 RRAGAQ7L523 313 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 MYCT1Q8N699 235 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CYB5D2Q8WUJ1 264 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 KIFAP3Q92845 792 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 MYLPFQ96A32 169 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 JAKMIP2Q96AA8 810 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CEP295NLQ96MC4 621 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CATSPER2Q96P56 530 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 FIZ1Q96SL8 496 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CIPCQ9C0C6 399 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 LACRTQ9GZZ8 138 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 RSPH9Q9H1X1 276 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 IKZF4Q9H2S9 585 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 HAUS4Q9H6D7 363 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 GUCA1BQ9UMX6 200 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF106Q9H2Y7 1883 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 CTAGE9A4FU28 777 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 ARHGEF35A5YM69 484 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 LRRC72A6NJI9 287 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 LRRC53A6NM62 1247 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 EFCAB7A8K855 629 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 EFCAB8A8MWE9 144 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 PDXKO00764 312 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 MID1O15344 667 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 SLC16A4O15374 487 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 CLDN3O15551 220 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 SORBS2O94875 1100 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 GCNT3O95395 438 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 NR3C1P04150 777 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 ZDHHC11BP0C7U3 371 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 H2AFXP16104 143 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 NR2F2P24468 414 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 LMO2P25791 158 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 CASP4P49662 377 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 KRT83P78385 493 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 APBA1Q02410 837 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 OVGP1Q12889 678 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 MAPK7Q13164 816 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 TTC31Q49AM3 519 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF542PQ5EBM4 170 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 NUGGCQ68CJ6 796 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF776Q68DI1 518 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 TCTN3Q6NUS6 607 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 ASB18Q6ZVZ8 466 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 ANKS1BQ7Z6G8 1248 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 KIAA1328Q86T90 577 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 APOBEC4Q8WW27 367 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 UBXN4Q92575 508 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 MRGPRX2Q96LB1 330 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 C8orf48Q96LL4 319 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 C5orf34Q96MH7 638 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 TSPAN18Q96SJ8 248 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 NAPGQ99747 312 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 CRACR2AQ9BSW2 395 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 GANQ9H2C0 597 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 GSX1Q9H4S2 264 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 NLRC4Q9NPP4 1024 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 MYO1AQ9UBC5 1043 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 CDC23Q9UJX2 597 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 SLC5A6Q9Y289 635 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 LOXL2Q9Y4K0 774 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 PCDHA13Q9Y5I0 950 aa7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.53□□□□□ -1.2
CTNNA1-227ENST00000521387 MAP1AP78559 2803 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 A0A1W2PQM1 296 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 MUSKO15146 869 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 EIF3DO15371 548 aaKnown RBP eCLIP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 HIP1RO75146 1068 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 LCA5LO95447 670 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 KLKB1P03952 638 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 PRKAR1AP10644 381 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ALPPL2P10696 532 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC9A1P19634 815 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 KIF11P52732 1056 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 VAV2P52735 878 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ZNF131P52739 623 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ADPRHP54922 357 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 POLR2FP61218 127 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 PSMC1P62191 440 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 IFRD2Q12894 506 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 TUBB2AQ13885 445 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 SPIDRQ14159 915 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 EIF4HQ15056 248 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms