RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 C22orf39Q6P5X5 142 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 GCNT7Q6ZNI0 430 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 TMC6Q7Z403 805 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 SPACA3Q8IXA5 215 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 LSMEM2Q8N112 164 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 FAM181AQ8N9Y4 354 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 ZNF248Q8NDW4 579 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 PGAP3Q96FM1 320 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-204ENST00000521331 C1orf74Q96LT6 269 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 ZNF578Q96N58 590 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-204ENST00000521331 DEPDC7Q96QD5 511 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 NPY6RQ99463 290 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 LGMNQ99538 433 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 FZD3Q9NPG1 666 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRKDC-204ENST00000521331 IL36AQ9UHA7 158 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 ZFR2Q9UPR6 939 aaKnown RBP15.22■□□□□ 0.03
PRKDC-204ENST00000521331 HS3ST3A1Q9Y663 406 aa15.22■□□□□ 0.03
PRKDC-204ENST00000521331 KALRNO60229 2985 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 RIOK3O14730 519 aaKnown RBP15.21■□□□□ 0.03
PRKDC-204ENST00000521331 SCAMP1O15126 338 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 SMAD6O43541 496 aaKnown RBP15.21■□□□□ 0.03
PRKDC-204ENST00000521331 C1QL1O75973 258 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 GIMD1P0DJR0 217 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 PON1P27169 355 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 SULT1E1P49888 294 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 NEK3P51956 506 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 PCBP4P57723 403 aaKnown RBP15.21■□□□□ 0.03
PRKDC-204ENST00000521331 HNRNPKP61978 463 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRKDC-204ENST00000521331 RPS21P63220 83 aaKnown RBP15.21■□□□□ 0.03
PRKDC-204ENST00000521331 DEUP1Q05D60 604 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 BECN1Q14457 450 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 TMEM259Q4ZIN3 620 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 SEL1L3Q68CR1 1132 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 KIAA1161Q6NSJ0 714 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 ZNF783Q6ZMS7 281 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 ZSCAN30Q86W11 494 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 CREBRFQ8IUR6 639 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 ZNF683Q8IZ20 524 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 SLC22A18ASQ8N1D0 253 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 CHST14Q8NCH0 376 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 GRIN3AQ8TCU5 1115 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 NT5C3BQ969T7 300 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 APOLD1Q96LR9 279 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 CEP44Q9C0F1 390 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 PCDHB1Q9Y5F3 818 aa15.21■□□□□ 0.03
PRKDC-204ENST00000521331 IGLV3-10A0A075B6K4 115 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 A0A0D9SEW6 157 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 ILVBLA1L0T0 632 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 LEFTY1O75610 366 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 DXOO77932 396 aaKnown RBP15.2■□□□□ 0.02
PRKDC-204ENST00000521331 OR1E1P30953 314 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 SCNN1AP37088 669 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 UCNP55089 124 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 CLDN2P57739 230 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 BPIFB4P59827 614 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 RNASE9P60153 205 aaKnown RBP15.2■□□□□ 0.02
PRKDC-204ENST00000521331 CXADRP78310 365 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 APBA1Q02410 837 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 SLC20A2Q08357 652 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 SLC25A52Q3SY17 297 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 BROXQ5VW32 411 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 RETSATQ6NUM9 610 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 LINGO4Q6UY18 593 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 KYAT3Q6YP21 454 aaKnown RBP15.2■□□□□ 0.02
PRKDC-204ENST00000521331 DPY19L3Q6ZPD9 716 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 Q6ZSR6 202 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 PTAR1Q7Z6K3 402 aaPredicted RBP15.2■□□□□ 0.02
PRKDC-204ENST00000521331 TFAP2DQ7Z6R9 452 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 SLC47A2Q86VL8 602 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 PCDH20Q8N6Y1 951 aaKnown RBP15.2■□□□□ 0.02
PRKDC-204ENST00000521331 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 HIC2Q96JB3 615 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 FEM1CQ96JP0 617 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 TNKS2Q9H2K2 1166 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 ANLNQ9NQW6 1124 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 GPR27Q9NS67 375 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 DNAJC28Q9NX36 388 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 NCKIPSDQ9NZQ3 722 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 MPP6Q9NZW5 540 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
PRKDC-204ENST00000521331 CAPN8A6NHC0 703 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 H3BM21 787 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 I6L893 689 aaPredicted RBP15.19■□□□□ 0.02
PRKDC-204ENST00000521331 ADRB3P13945 408 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
PRKDC-204ENST00000521331 ITGB7P26010 798 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 CLCN1P35523 988 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 LSSP48449 732 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 SERPINH1P50454 418 aaKnown RBP15.19■□□□□ 0.02
PRKDC-204ENST00000521331 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 GABREP78334 506 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 HAPLN3Q96S86 360 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 HEPHQ9BQS7 1158 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 SLC17A9Q9BYT1 436 aa15.19■□□□□ 0.02
PRKDC-204ENST00000521331 PDCL3Q9H2J4 239 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms