RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 K7ERQ8 282 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 SMAD6O43541 496 aaKnown RBP13.98□□□□□ -0.17
VDAC3-204ENST00000519072 PIAS2O75928 621 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 C1QL1O75973 258 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 PRB1P04280 392 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 GIMD1P0DJR0 217 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 CKMT1AP12532 417 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 RRM1P23921 792 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 KRT9P35527 623 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 CDCP2Q5VXM1 449 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 C22orf39Q6P5X5 142 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 GCNT7Q6ZNI0 430 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 ERN2Q76MJ5 926 aaKnown RBP13.98□□□□□ -0.17
VDAC3-204ENST00000519072 ZDHHC17Q8IUH5 632 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 CHST14Q8NCH0 376 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 OR13H1Q8NG92 308 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 NT5C3BQ969T7 300 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 PGAP3Q96FM1 320 aaPredicted RBP13.98□□□□□ -0.17
VDAC3-204ENST00000519072 CALN1Q9BXU9 219 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 WDCPQ9H6R7 721 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 SYNCQ9H7C4 482 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 FZD3Q9NPG1 666 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 TMEM51Q9NW97 253 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.98□□□□□ -0.17
VDAC3-204ENST00000519072 STAP1Q9ULZ2 295 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 ZFR2Q9UPR6 939 aaKnown RBP13.98□□□□□ -0.17
VDAC3-204ENST00000519072 CHD5Q8TDI0 1954 aa13.98□□□□□ -0.17
VDAC3-204ENST00000519072 COL6A6A6NMZ7 2263 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 TEX51A0A1B0GUA7 166 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 RNF103O00237 685 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 FFAR2O15552 330 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 PCDH8O95206 1070 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 F9P00740 461 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 ALPPL2P10696 532 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 TFE3P19532 575 aaPredicted RBP13.97□□□□□ -0.17
VDAC3-204ENST00000519072 PON1P27169 355 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 CLCN1P35523 988 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 SULT1E1P49888 294 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 TLE3Q04726 772 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 CCDC173Q0VFZ6 552 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 TMEM259Q4ZIN3 620 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 ACBD5Q5T8D3 534 aaPredicted RBP13.97□□□□□ -0.17
VDAC3-204ENST00000519072 LRRC31Q6UY01 552 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 GPR155Q7Z3F1 870 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 TMC6Q7Z403 805 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 DCP2Q8IU60 420 aaKnown RBP13.97□□□□□ -0.17
VDAC3-204ENST00000519072 SPACA3Q8IXA5 215 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 SLC22A18ASQ8N1D0 253 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 PPP1R16AQ96I34 528 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 C1orf74Q96LT6 269 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 USP29Q9HBJ7 922 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 SIX2Q9NPC8 291 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 GPR27Q9NS67 375 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 NLGN3Q9NZ94 848 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 IL36AQ9UHA7 158 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 RWDD2AQ9UIY3 292 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 AJAP1Q9UKB5 411 aaPredicted RBP13.97□□□□□ -0.17
VDAC3-204ENST00000519072 PAXBP1Q9Y5B6 917 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 PCDHB1Q9Y5F3 818 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 SNX10Q9Y5X0 201 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 HS3ST3A1Q9Y663 406 aa13.97□□□□□ -0.17
VDAC3-204ENST00000519072 COL27A1Q8IZC6 1860 aaPredicted RBP13.96□□□□□ -0.17
VDAC3-204ENST00000519072 IGLV3-10A0A075B6K4 115 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 A0A0D9SEW6 157 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 NEMP2A6NFY4 417 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 A6NNZ2 444 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 OPA1O60313 960 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 GP1BAP07359 652 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 SCNN1AP37088 669 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 RECQLP46063 649 aaPredicted RBP13.96□□□□□ -0.17
VDAC3-204ENST00000519072 CLDN2P57739 230 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 SEL1L3Q68CR1 1132 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 DPY19L3Q6ZPD9 716 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 SLC47A2Q86VL8 602 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 FAM181AQ8N9Y4 354 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 ZNF248Q8NDW4 579 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 GRIN3AQ8TCU5 1115 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 APOLD1Q96LR9 279 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 ZNF578Q96N58 590 aaPredicted RBP13.96□□□□□ -0.17
VDAC3-204ENST00000519072 DEPDC7Q96QD5 511 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 TNKS2Q9H2K2 1166 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 MPP6Q9NZW5 540 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 DNAJC12Q9UKB3 198 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 WASF2Q9Y6W5 498 aa13.96□□□□□ -0.17
VDAC3-204ENST00000519072 RP1P56715 2156 aa13.96□□□□□ -0.18
VDAC3-204ENST00000519072 LY6G6EA0A0G2JKS1 128 aa13.95□□□□□ -0.18
VDAC3-204ENST00000519072 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
VDAC3-204ENST00000519072 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
VDAC3-204ENST00000519072 SCAMP1O15126 338 aa13.95□□□□□ -0.18
VDAC3-204ENST00000519072 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
VDAC3-204ENST00000519072 ZNF821O75541 412 aaPredicted RBP13.95□□□□□ -0.18
VDAC3-204ENST00000519072 LEFTY1O75610 366 aa13.95□□□□□ -0.18
VDAC3-204ENST00000519072 DXOO77932 396 aaKnown RBP13.95□□□□□ -0.18
VDAC3-204ENST00000519072 ITGB7P26010 798 aa13.95□□□□□ -0.18
VDAC3-204ENST00000519072 OR1E1P30953 314 aa13.95□□□□□ -0.18
VDAC3-204ENST00000519072 CDH5P33151 784 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms