RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 HTRA1Q92743 480 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 VPS33AQ96AX1 596 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 HDAC11Q96DB2 347 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 FAM84AQ96KN4 292 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 AASDHPPTQ9NRN7 309 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SNTG2Q9NY99 539 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SLC17A6Q9P2U8 582 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 RAD54BQ9Y620 910 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 SCN4AP35499 1836 aa13.76□□□□□ -0.21
PABPC1-208ENST00000519004 PRORSD1PA6NEY8 169 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 SYCE1LA8MT33 242 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CCND2P30279 289 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 PPIL2Q13356 520 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 SUZ12Q15022 739 aaKnown RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 NFE2Q16621 373 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 LINC00299Q6ZSB3 139 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CHAC2Q8WUX2 184 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CANT1Q8WVQ1 401 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 BTN2A3PQ96KV6 586 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 APBA2Q99767 749 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 SEZ6LQ9BYH1 1024 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CCDC177Q9NQR7 707 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 RAB6BQ9NRW1 208 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 UGT2A1Q9Y4X1 527 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 B4GAT1O43505 415 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 DEAF1O75398 565 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 MTRF1O75570 445 aaKnown RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 DDX5P17844 614 aaKnown RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ITIH1P19827 911 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ADORA2AP29274 412 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CAPGP40121 348 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ATP6AP1Q15904 470 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 PCSK7Q16549 785 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 CRTC3Q6UUV7 619 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ANKRD13AQ8IZ07 590 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ELMOD2Q8IZ81 293 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 FUNDC2Q9BWH2 189 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 MAGEE1Q9HCI5 957 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 FBXO8Q9NRD0 319 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 ZNF358Q9NW07 568 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 PKD2L2Q9NZM6 624 aa13.75□□□□□ -0.21
PABPC1-208ENST00000519004 IGKV6D-41A0A0C4DH26 115 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 MPSTP25325 297 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 CD40LGP29965 261 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 GTF2IP78347 998 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 SLC25A11Q02978 314 aaKnown RBP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 MMRN1Q13201 1228 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 SMU1Q2TAY7 513 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 PPM1JQ5JR12 505 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 KCNT1Q5JUK3 1230 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 USP51Q70EK9 711 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 SCML4Q8N228 414 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 MPP5Q8N3R9 675 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 CXorf38Q8TB03 319 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 FIG4Q92562 907 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 NRBF2Q96F24 287 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 C12orf10Q9HB07 376 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 MRPL40Q9NQ50 206 aaKnown RBP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 XPNPEP3Q9NQH7 507 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 WDR64B1ANS9 1081 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 APOC4-APOC2K7ER74 178 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 VWA5AO00534 786 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 UGT2B11O75310 529 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 ALDH1A2O94788 518 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 DDHD2O94830 711 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 APOC2P02655 101 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 MMP8P22894 467 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 KDELR1P24390 212 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 IL1R2P27930 398 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 CLCNKBP51801 687 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 HSPA14Q0VDF9 509 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 SELPLGQ14242 412 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 AASDHQ4L235 1098 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 CYBRD1Q53TN4 286 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 RSBN1Q5VWQ0 802 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 PRR23BQ6ZRT6 265 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 IRF2BPLQ9H1B7 796 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 SOX17Q9H6I2 414 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.21
PABPC1-208ENST00000519004 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 CD300AQ9UGN4 299 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
PABPC1-208ENST00000519004 FOCADQ5VW36 1801 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms