RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 RBM44Q6ZP01 1051 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 ERN2Q76MJ5 926 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 RRAGAQ7L523 313 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 CLEC14AQ86T13 490 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 ARHGEF19Q8IW93 802 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 TMIEQ8NEW7 156 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 GRAMD1AQ96CP6 724 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 CCDC97Q96F63 343 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 PSMB7Q99436 277 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 TRIM62Q9BVG3 475 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 FAM204AQ9H8W3 233 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 ARMCX3Q9UH62 379 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 IL17BQ9UHF5 180 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 VANGL2Q9ULK5 521 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 TBC1D30Q9Y2I9 924 aa11.62□□□□□ -0.55
CTNNA1-205ENST00000517904 UTP20O75691 2785 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 TERTO14746 1132 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 SPINT1O43278 529 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 AQP9O43315 295 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 TNFSF15O95150 251 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 RRM1P23921 792 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 NFKB2Q00653 900 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 C14orf80Q86SX3 495 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 TMEM110Q86TL2 294 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 PARGQ86W56 976 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 DCP2Q8IU60 420 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 ARL14Q8N4G2 192 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 ATP11CQ8NB49 1132 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 WDR36Q8NI36 951 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 GRIN3AQ8TCU5 1115 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 SPATA32Q96LK8 384 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 KREMEN1Q96MU8 473 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 CCNL2Q96S94 520 aaPredicted RBP11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 PPP1R9BQ96SB3 815 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC17A9Q9BYT1 436 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 MUC3BQ9H195 1237 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 TNKS2Q9H2K2 1166 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 THAP9Q9H5L6 903 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 METTL14Q9HCE5 456 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 DDIT4Q9NX09 232 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 COX16Q9P0S2 106 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC12A6Q9UHW9 1150 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 VPS51Q9UID3 782 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 HS3ST4Q9Y661 456 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 HS3ST3A1Q9Y663 406 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
CTNNA1-205ENST00000517904 MUSKO15146 869 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 PMM2O15305 246 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 CLDN11O75508 207 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 TCEA3O75764 348 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 CNTN5O94779 1100 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 ZNF202O95125 648 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 PAK4O96013 591 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 PRNPP04156 253 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 ITGA2BP08514 1039 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC2A3P11169 496 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 CCR1P32246 355 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 GCNT1Q02742 428 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 PNOCQ13519 176 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 PDE1CQ14123 709 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 C5orf22Q49AR2 442 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 ALFQ53S48 1182 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 LINGO4Q6UY18 593 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC35F3Q8IY50 421 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 RBFAQ8N0V3 343 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 DEFB106AQ8N104 65 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 FAM174AQ8TBP5 190 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 LMX1AQ8TE12 382 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 RNF34Q969K3 372 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 SLC2A13Q96QE2 648 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 KLF6Q99612 283 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 TSG101Q99816 390 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 BOCQ9BWV1 1114 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 TCEAL2Q9H3H9 227 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 ACP6Q9NPH0 428 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 DYRK4Q9NR20 520 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 NCKIPSDQ9NZQ3 722 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 SALL4Q9UJQ4 1053 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 ATXN7L1Q9ULK2 861 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 PNMA8BQ9ULN7 279 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 CNTN6Q9UQ52 1028 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 HEMK1Q9Y5R4 338 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 WASF2Q9Y6W5 498 aa11.6□□□□□ -0.55
CTNNA1-205ENST00000517904 CCDC187A0A096LP49 1063 aa11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 A0A0D9SEW6 157 aa11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 H3BM21 787 aa11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 I6L893 689 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 NOBOXO60393 691 aa11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 PAGE1O75459 146 aa11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 ZNF821O75541 412 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 GCATO75600 419 aa11.59□□□□□ -0.55
CTNNA1-205ENST00000517904 LEFTY1O75610 366 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms