RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PTAR1Q7Z6K3 402 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ZCCHC7Q8N3Z6 543 aaKnown RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 OR2T34Q8NGX1 318 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 OR2T3Q8NH03 318 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 FBXO27Q8NI29 283 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PCDH19Q8TAB3 1148 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 KCTD4Q8WVF5 259 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 LRTOMTQ8WZ04 291 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PRICKLE1Q96MT3 831 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-203ENST00000517490 PRKD2Q9BZL6 878 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CXorf21Q9HAI6 301 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 ERAP1Q9NZ08 941 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 GPRC5DQ9NZD1 345 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 CNTN6Q9UQ52 1028 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 V9GYQ6 96 aa6.76□□□□□ -1.33
CPNE3-203ENST00000517490 BBIP1A8MTZ0 92 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 VPS4BO75351 444 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 BCAS2O75934 225 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 EIF2S1P05198 315 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NFICP08651 508 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TXNP10599 105 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NFKBIAP25963 317 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 S100A5P33763 92 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CLCN3P51790 818 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NRLP54845 237 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 RAB10P61026 200 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PSMD5Q16401 504 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ZBED5Q49AG3 693 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 POTEHQ6S545 545 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ASB9Q96DX5 294 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 P2RY11Q96G91 374 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CSPG4P5Q96PW8 444 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 GLIS2Q9BZE0 524 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FAM49AQ9H0Q0 323 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 RHOJQ9H4E5 214 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FAM124BQ9H5Z6 455 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PALMDQ9NP74 551 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TUBA8Q9NY65 449 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 UTP6Q9NYH9 597 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 XPR1Q9UBH6 696 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 UBQLN1Q9UMX0 589 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CLEC11AQ9Y240 323 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 COQ6Q9Y2Z9 468 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TELO2Q9Y4R8 837 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 STYXL1Q9Y6J8 313 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 DDX60Q8IY21 1712 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 IRS2Q9Y4H2 1338 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PAPSS1O43252 624 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NRP2O60462 931 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 DNAJA2O60884 412 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FBXO21O94952 628 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 METTL18O95568 372 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 KCNA2P16389 499 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CHRNA5P30532 468 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 POLD2P49005 469 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 MRPS5P82675 430 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CDC42EP1Q00587 391 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 EPS8Q12929 822 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 BFSP2Q13515 415 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF846Q147U1 533 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PCLAFQ15004 111 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 MYLK3Q32MK0 819 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FUT11Q495W5 492 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TEX44Q53QW1 395 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF484Q5JVG2 852 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 KRT27Q7Z3Y8 459 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 KDELC2Q7Z4H8 507 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 DEFB106AQ8N104 65 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SEPT8Q92599 483 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NSMCE2Q96MF7 247 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PKP2Q99959 881 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 HOPXQ9BPY8 73 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ELOVL4Q9GZR5 314 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PRDM12Q9H4Q4 367 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 EPS8L2Q9H6S3 715 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CATSPERBQ9H7T0 1116 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CAB39LQ9H9S4 337 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SETD4Q9NVD3 440 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CPSF3Q9UKF6 684 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 RAD54BQ9Y620 910 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PAPPAQ13219 1627 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SUPT3HB4E1H0 165 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TIPRLO75663 272 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ALOX5P09917 674 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 GOT1P17174 413 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SLC7A1P30825 629 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SOX11P35716 441 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ASPAP45381 313 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SLC7A2P52569 658 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF135P52742 658 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TNK2Q07912 1038 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FAM98BQ52LJ0 330 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PCID2Q5JVF3 399 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 UGT2A3Q6UWM9 527 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 KBTBD6Q86V97 674 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 UNC93AQ86WB7 457 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SLC41A1Q8IVJ1 513 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms