RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 GPR174Q9BXC1 333 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 PCED1AQ9H1Q7 454 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 SGK2Q9HBY8 427 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 PCDH18Q9HCL0 1135 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 VPS45Q9NRW7 570 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 RCOR3Q9P2K3 495 aaPredicted RBP11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 PILRBQ9UKJ0 227 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 THADAQ6YHU6 1953 aa11.37□□□□□ -0.59
SCARNA20-201ENST00000516768 NUP205Q92621 2012 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 CHD5Q8TDI0 1954 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 GVINP1Q7Z2Y8 2422 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 A0A1W2PP55 124 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 ARHGAP42A6NI28 874 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 SOWAHDA6NJG2 315 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 J3KR12 359 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 BNIP3LO60238 219 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 POP4O95707 220 aaKnown RBP11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 CTSLP07711 333 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 KRT7P08729 469 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 ITPKAP23677 461 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 DRD3P35462 400 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 DPP6P42658 865 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 SLC1A1P43005 524 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 RECQLP46063 649 aaPredicted RBP11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 DNA2P51530 1060 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 CDH6P55285 790 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 PDK2Q15119 407 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 CCDC6Q16204 474 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 SYCP2LQ5T4T6 812 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 LYSMD4Q5XG99 296 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 C22orf39Q6P5X5 142 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 RAD9BQ6WBX8 426 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 LEKR1Q6ZMV7 388 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 ZNF354CQ86Y25 554 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 TMEM139Q8IV31 216 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 ARHGAP12Q8IWW6 846 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 HDDC3Q8N4P3 179 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 KCTD6Q8NC69 237 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 PIP4K2CQ8TBX8 421 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 GANCQ8TET4 914 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 PIGKQ92643 395 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 FAM131CQ96AQ9 280 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 CELF6Q96J87 481 aaKnown RBP11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 BAG1Q99933 345 aaPredicted RBP11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 HEPHQ9BQS7 1158 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 TNKS2Q9H2K2 1166 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 ETNK2Q9NVF9 386 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 SERGEFQ9UGK8 458 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 FZD4Q9ULV1 537 aa11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 FCF1Q9Y324 198 aaKnown RBP11.36□□□□□ -0.59
SCARNA20-201ENST00000516768 PLXND1Q9Y4D7 1925 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 ZNF292O60281 2723 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 A0A0A6YYK5 440 aaPredicted RBP11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 TMEM110-MUSTN1A8MSY1 372 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 C10orf142B7Z368 130 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 RNASEH2AO75792 299 aaKnown RBP11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 SEMA4FO95754 770 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 PRNPP04156 253 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 CD48P09326 243 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 MAOBP27338 520 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 HOXD12P35452 270 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 NOP2P46087 812 aaKnown RBP11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 PSMD8P48556 350 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 METAP1P53582 386 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 IRX4P78413 519 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 MMRN1Q13201 1228 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 KRT81Q14533 505 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 CYTH1Q15438 398 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 MYLK3Q32MK0 819 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 WDR45BQ5MNZ6 344 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 LRRC38Q5VT99 294 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 PEAR1Q5VY43 1037 aaPredicted RBP11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 PRR23CQ6ZRP0 262 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 ARMCX6Q7L4S7 300 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 NPWQ8N729 165 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 CHST14Q8NCH0 376 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 OR2AP1Q8NGE2 309 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 CEP76Q8TAP6 659 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 VOPP1Q96AW1 172 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 HSPA12BQ96MM6 686 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 C6orf106Q9H6K1 298 aaPredicted RBP11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 PDFQ9HBH1 243 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 IL36AQ9UHA7 158 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 TFR2Q9UP52 801 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 ALG6Q9Y672 507 aa11.35□□□□□ -0.59
SCARNA20-201ENST00000516768 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 PRR5-ARHGAP8B1AHC4 643 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 RNF103O00237 685 aa11.34□□□□□ -0.59
SCARNA20-201ENST00000516768 KHNYNO15037 678 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms