RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	RABIF	P47224	123 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	MXI1	P50539	228 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	PLK1	P53350	603 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	CENPC	Q03188	943 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	CCDC15	Q0P6D6	951 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	C1orf61	Q13536	156 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	FGL2	Q14314	439 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	PRRT3	Q5FWE3	981 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	PMF1	Q6P1K2	205 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	ZFAND4	Q86XD8	727 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	FAM26E	Q8N5C1	309 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	SH2D3C	Q8N5H7	860 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	GRIN3A	Q8TCU5	1115 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	BTN2A3P	Q96KV6	586 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	IGSF5	Q9NSI5	407 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	SPAST	Q9UBP0	616 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	APOBEC3B	Q9UH17	382 aa	Known RBP	10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	VPS28	Q9UK41	221 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	PADI4	Q9UM07	663 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	TRAF3IP3	Q9Y228	551 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	HS3ST3A1	Q9Y663	406 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620	BSN	Q9UPA5	3926 aa		10.75	□□□□□ -0.69
CLDND1-231	ENST00000515620		M0QYV0	167 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	RNF103	O00237	685 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	NVL	O15381	856 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	SPINT1	O43278	529 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	FBXO21	O94952	628 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	PAK4	O96013	591 aa	Predicted RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ANXA6	P08133	673 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ITIH1	P19827	911 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	CHRNA3	P32297	505 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	GTF2H1	P32780	548 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	PSMC2	P35998	433 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	CASR	P41180	1078 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ADK	P55263	362 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	OXCT1	P55809	520 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	RPS21	P63220	83 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	EIF2B5	Q13144	721 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	KCNAB2	Q13303	367 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	CUL2	Q13617	745 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	MORC3	Q14149	939 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	RABGAP1L	Q5R372	815 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	LCLAT1	Q6UWP7	414 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ERN2	Q76MJ5	926 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	CEP57L1	Q8IYX8	460 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	OR52K2	Q8NGK3	314 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	SLC35F5	Q8WV83	523 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	TFAP2B	Q92481	460 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	CCDC74A	Q96AQ1	378 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	FAM149B1	Q96BN6	582 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ALG14	Q96F25	216 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	CCDC114	Q96M63	670 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	GFM1	Q96RP9	751 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	PRMT1	Q99873	361 aa	Known RBP	10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	FEM1A	Q9BSK4	669 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	LRRC61	Q9BV99	259 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	SLC17A9	Q9BYT1	436 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ADNP	Q9H2P0	1102 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	LRRC4C	Q9HCJ2	640 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	FOXJ2	Q9P0K8	574 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	RABGEF1	Q9UJ41	708 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	LOXL2	Q9Y4K0	774 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	PCDHB11	Q9Y5F2	797 aa		10.74	□□□□□ -0.69
CLDND1-231	ENST00000515620	ENO4	A6NNW6	628 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	LMO7DN	F2Z398	122 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	FPGT	O14772	594 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	MT-CO1	P00395	513 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	PRNP	P04156	253 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	RPLP0	P05388	317 aa	Known RBP	10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	SRC	P12931	536 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	IRAK1	P51617	712 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	POLE2	P56282	527 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	YWHAE	P62258	255 aa	Known RBP	10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	C8orf34	Q49A92	452 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	SYPL2	Q5VXT5	272 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	KIAA1161	Q6NSJ0	714 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	ESRP1	Q6NXG1	681 aa	Known RBP	10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	PHACTR4	Q8IZ21	702 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	SDR16C5	Q8N3Y7	309 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	ATP6V0D2	Q8N8Y2	350 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	ATP11C	Q8NB49	1132 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	KY	Q8NBH2	561 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	CHST14	Q8NCH0	376 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	TMIE	Q8NEW7	156 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	OR2A12	Q8NGT7	310 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	BTN2A2	Q8WVV5	523 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	PPP1R16A	Q96I34	528 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	RPRD1A	Q96P16	312 aa	Predicted RBP	10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	PPP1R9B	Q96SB3	815 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	HDAC8	Q9BY41	377 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	CPEB1	Q9BZB8	566 aa	Known RBP	10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	SIRPG	Q9P1W8	387 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	GULP1	Q9UBP9	304 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	MTMR6	Q9Y217	621 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	SPTBN1	Q01082	2364 aa	Known RBP	10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	CREBBP	Q92793	2442 aa		10.73	□□□□□ -0.69
CLDND1-231	ENST00000515620	ANKRD17	O75179	2603 aa	Known RBP	10.72	□□□□□ -0.69

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