RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 PDZD3Q86UT5 571 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 LUZP1Q86V48 1076 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 HORMAD1Q86X24 394 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 ZYG11BQ9C0D3 744 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 KLHL11Q9NVR0 708 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 MPP6Q9NZW5 540 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 PPARGC1AQ9UBK2 798 aaKnown RBP12.8□□□□□ -0.36
YIPF3-217ENST00000514627 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
YIPF3-217ENST00000514627 COL5A1P20908 1838 aaPredicted RBP12.8□□□□□ -0.36
YIPF3-217ENST00000514627 A0A1W2PQU0 124 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 F8VZ95 297 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 K7ERQ8 282 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 SLC31A1O15431 190 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 SMAD6O43541 496 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 SRGAP2O75044 1071 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ZMPSTE24O75844 475 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 HNRNPA2B1P22626 353 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 RRM1P23921 792 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 AKT2P31751 481 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ETFBP38117 255 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 NOMO3P69849 1222 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 DNAJC3Q13217 504 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ZNF211Q13398 564 aaPredicted RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 COL28A1Q2UY09 1125 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ZNF284Q2VY69 593 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 TCP11X2Q5H9J9 407 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 C22orf39Q6P5X5 142 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 TFAP2DQ7Z6R9 452 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ZSCAN30Q86W11 494 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 MARCH9Q86YJ5 346 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 DCP2Q8IU60 420 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 PLPP6Q8IY26 295 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 PCDH20Q8N6Y1 951 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 EPS8L1Q8TE68 723 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ARRDC3Q96B67 414 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 IFT43Q96FT9 208 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 SPON2Q9BUD6 331 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 NRSN2Q9GZP1 204 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 SAMSN1Q9NSI8 373 aaKnown RBP12.79□□□□□ -0.36
YIPF3-217ENST00000514627 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 IL36AQ9UHA7 158 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 DAAM1Q9Y4D1 1078 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 SNX10Q9Y5X0 201 aa12.79□□□□□ -0.36
YIPF3-217ENST00000514627 PTPRBP23467 1997 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 CBX4O00257 560 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 THEGLP0DJG4 465 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 ACP1P24666 158 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 SERPINH1P50454 418 aaKnown RBP12.78□□□□□ -0.36
YIPF3-217ENST00000514627 E2F1Q01094 437 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 NRG1Q02297 640 aaPredicted RBP12.78□□□□□ -0.36
YIPF3-217ENST00000514627 GNA12Q03113 381 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 NCAPHQ15003 741 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 HS1BP3Q53T59 392 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 CARD16Q5EG05 197 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 ARSIQ5FYB1 569 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 ARTNQ5T4W7 220 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 LINGO4Q6UY18 593 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 DPY19L3Q6ZPD9 716 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 FAM131BQ86XD5 332 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 CHST14Q8NCH0 376 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 OR7D4Q8NG98 312 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 HNRNPLLQ8WVV9 542 aaKnown RBP12.78□□□□□ -0.36
YIPF3-217ENST00000514627 CPA5Q8WXQ8 436 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 RFFLQ8WZ73 363 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
YIPF3-217ENST00000514627 FEM1CQ96JP0 617 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 HEPHQ9BQS7 1158 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 ATP13A1Q9HD20 1204 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 HS3ST3A1Q9Y663 406 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 PLXNA2O75051 1894 aa12.78□□□□□ -0.36
YIPF3-217ENST00000514627 CELSR3Q9NYQ7 3312 aa12.77□□□□□ -0.36
YIPF3-217ENST00000514627 TMEM131Q92545 1883 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 AP1G1O43747 822 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 ZNF821O75541 412 aaPredicted RBP12.77□□□□□ -0.37
YIPF3-217ENST00000514627 LEFTY1O75610 366 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 PCDH8O95206 1070 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
YIPF3-217ENST00000514627 MMEP08473 750 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
YIPF3-217ENST00000514627 PRLRP16471 622 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 MMP8P22894 467 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 DGKAP23743 735 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 ITGB7P26010 798 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 ADRA1BP35368 520 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 NEK3P51956 506 aa12.77□□□□□ -0.37
YIPF3-217ENST00000514627 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
YIPF3-217ENST00000514627 RPS21P63220 83 aaKnown RBP12.77□□□□□ -0.37
YIPF3-217ENST00000514627 CDR2Q01850 454 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms