RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 GJB6O95452 261 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 C6P13671 934 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 RGS7P49802 495 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 TLE3Q04726 772 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 ADIGQ0VDE8 80 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 NNTQ13423 1086 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 SUZ12Q15022 739 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 DPYSL2Q16555 572 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 PTPRNQ16849 979 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 FBXO38Q6PIJ6 1188 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 DBX2Q6ZNG2 339 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 BBS12Q6ZW61 710 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 BHLHA9Q7RTU4 235 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 TMPRSS12Q86WS5 348 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 CPNE8Q86YQ8 564 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 MAP7D3Q8IWC1 876 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 SCN4BQ8IWT1 228 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 SPACA3Q8IXA5 215 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 SIX6OS1Q8N1H7 587 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 ZNF276Q8N554 614 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 FOXJ1Q92949 421 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 NTAN1Q96AB6 310 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 SPATA17Q96L03 361 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 ACOX2Q99424 681 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 ZNF670Q9BS34 389 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 LRRC1Q9BTT6 524 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 GPR174Q9BXC1 333 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 RAB17Q9H0T7 212 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 CPNE5Q9HCH3 593 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 SMPD4Q9NXE4 827 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 HCN2Q9UL51 889 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 ARHGAP26Q9UNA1 814 aa10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 V9GYY5 206 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-217ENST00000512274 PTPRQQ9UMZ3 2332 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 CLDN5O00501 218 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TRIM24O15164 1050 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 BCAT2O15382 392 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 PRPSAP2O60256 369 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 BEST1O76090 585 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 ZBED1O96006 694 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 F9P00740 461 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 RARAP10276 462 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 ADH5P11766 374 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 NCAM1P13591 858 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TCF3P15923 654 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 KDELR1P24390 212 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 IL1R2P27930 398 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 NTSR1P30989 418 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 EIF2DP41214 584 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 IL12RB1P42701 662 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 CSNK1EP49674 416 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 CSRP3P50461 194 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 DNA2P51530 1060 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 CLCN6P51797 869 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TKTL1P51854 596 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 CACNA2D1P54289 1103 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 HDAC4P56524 1084 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 MAP3K7CLP57077 242 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 VSNL1P62760 191 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 RPL10AP62906 217 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TARDBPQ13148 414 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 EIF4EBP2Q13542 120 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 EGFLAMQ63HQ2 1017 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 EMBQ6PCB8 327 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 IL27RAQ6UWB1 636 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 SPOCD1Q6ZMY3 1216 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TRMT11Q7Z4G4 463 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 SPATA2LQ8IUW3 424 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 IFT20Q8IY31 132 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 EMC1Q8N766 993 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 SNIP1Q8TAD8 396 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 GRK7Q8WTQ7 553 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 FGF11Q92914 225 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TRMT2BQ96GJ1 504 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 KRT12Q99456 494 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 MED10Q9BTT4 135 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 ARFGAP3Q9NP61 516 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 TMEM30AQ9NV96 361 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 EIF2B4Q9UI10 523 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 DRG1Q9Y295 367 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-217ENST00000512274 CBX4O00257 560 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 NDC80O14777 642 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 RAD51CO43502 376 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 ADH1CP00326 375 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 IGLV3-25P01717 112 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 LTFP02788 710 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 KRT1P04264 644 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 NTRK1P04629 796 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 FYNP06241 537 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 RHOXF2BP0C7M4 288 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 RALAP11233 206 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 CD6P30203 668 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 HTR7P34969 479 aa10.76□□□□□ -0.69
PDLIM5-217ENST00000512274 HNF1BP35680 557 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms