RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 SLC12A6Q9UHW9 1150 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 VANGL2Q9ULK5 521 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 SNAP91O60641 907 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 ENDOD1O94919 500 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 PAK4O96013 591 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 IGLV3-25P01717 112 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 RRM1P23921 792 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 CMA1P23946 247 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 SLC5A2P31639 672 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 SYKP43405 635 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 PDE1CQ14123 709 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 SPIDRQ14159 915 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 FGL2Q14314 439 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 TMEM259Q4ZIN3 620 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 TPRG1LQ5T0D9 272 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 DENND1BQ6P3S1 775 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 DCP2Q8IU60 420 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 RBFAQ8N0V3 343 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 OR2A12Q8NGT7 310 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 TPCN2Q8NHX9 752 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 SGF29Q96ES7 293 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 CCDC114Q96M63 670 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 NT5C1BQ96P26 610 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 PPP1R9BQ96SB3 815 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 CCDC3Q9BQI4 270 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 TRIM62Q9BVG3 475 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 SLC17A9Q9BYT1 436 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 POPDC2Q9HBU9 364 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 EPB41L5Q9HCM4 733 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 GPR27Q9NS67 375 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 OR51B4Q9Y5P0 310 aa13.53□□□□□ -0.24
POLR2J3-216ENST00000511773 E5RJQ4 531 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 AGRPO00253 132 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 SUV39H1O43463 412 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 PRNPP04156 253 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 RABIFP47224 123 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 NDUFA8P51970 172 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 C1orf61Q13536 156 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 AUHQ13825 339 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 TAF5Q15542 800 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 ARSIQ5FYB1 569 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 LINGO4Q6UY18 593 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 ZNF574Q6ZN55 896 aaPredicted RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 SLC35F3Q8IY50 421 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 TMIEQ8NEW7 156 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 SLC35C1Q96A29 364 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 HDAC8Q9BY41 377 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 TCEAL2Q9H3H9 227 aaPredicted RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■■■□ 20.6
POLR2J3-216ENST00000511773 DDIT4Q9NX09 232 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 IL36AQ9UHA7 158 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 SALL4Q9UJQ4 1053 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 RCOR1Q9UKL0 485 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 HPSEQ9Y251 543 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 HS3ST2Q9Y278 367 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 HS3ST3A1Q9Y663 406 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 CSNK1G3Q9Y6M4 447 aa13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 UTP20O75691 2785 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-216ENST00000511773 PLD2O14939 933 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 SPINT1O43278 529 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 SMAD6O43541 496 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 GCATO75600 419 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 LEFTY1O75610 366 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 SLC2A3P11169 496 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 HGFP14210 728 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 CCR1P32246 355 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 MLLT3P42568 568 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 GPD2P43304 727 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 ACADSBP45954 432 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 RPIAP49247 311 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 ADKP55263 362 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 PKP1Q13835 747 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 TCEA2Q15560 299 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 PRRT3Q5FWE3 981 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 KIAA1161Q6NSJ0 714 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 BEND5Q7L4P6 421 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 VASH2Q86V25 355 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 FAM174AQ8TBP5 190 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 GLMNQ92990 594 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 PPP1R16AQ96I34 528 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 PPP1R13BQ96KQ4 1090 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 PSMB7Q99436 277 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 BOCQ9BWV1 1114 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 FOXP3Q9BZS1 431 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 SPASTQ9UBP0 616 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 APOBEC3BQ9UH17 382 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 ARMCX3Q9UH62 379 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 VPS51Q9UID3 782 aa13.51□□□□□ -0.25
POLR2J3-216ENST00000511773 NBASA2RRP1 2371 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms