RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 COMMD9Q9P000 198 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 FAM153AQ9UHL3 310 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ZNF780BQ9Y6R6 833 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 BCL9LQ86UU0 1499 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 CES2O00748 559 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SMNDC1O75940 238 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP38-203ENST00000511739 CPA3P15088 417 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 TPH1P17752 444 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 CRATP43155 626 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 FMR1Q06787 632 aaKnown RBP eCLIP5.85□□□□□ -1.474e-6■■■■□ 21.6
USP38-203ENST00000511739 NDUFA9Q16795 377 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PUS10Q3MIT2 529 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 AKIRIN2Q53H80 203 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 KLHDC7AQ5VTJ3 777 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 CHADLQ6NUI6 762 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 RGMBQ6NW40 437 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 NYAP1Q6ZVC0 841 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PHYKPLQ8IUZ5 450 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 TDRD5Q8NAT2 981 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 OR5T3Q8NGG3 340 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SYN2Q92777 582 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 NARS2Q96I59 477 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 SEPHS2Q99611 448 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 IL12RB2Q99665 862 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 MLPHQ9BV36 600 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 RIOX1Q9H6W3 641 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 MID1IP1Q9NPA3 183 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 VPS45Q9NRW7 570 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 DNPEPQ9ULA0 475 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SLC12A4Q9UP95 1085 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 CCDC154A6NI56 674 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SOCS7O14512 581 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 DCLK1O15075 740 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 VIPP01282 170 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 FTH1P02794 183 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ANXA6P08133 673 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 YBX3P16989 372 aaKnown RBP eCLIP5.85□□□□□ -1.474e-7■■■■■ 27.3
USP38-203ENST00000511739 HSD3B2P26439 372 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 NDST1P52848 882 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 MGAT5Q09328 741 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 STK4Q13043 487 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 LIN54Q6MZP7 749 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 GJB7Q6PEY0 223 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 RIPOR1Q6ZS17 1223 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 HEATR4Q86WZ0 1026 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 COL23A1Q86Y22 540 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 GPSM1Q86YR5 675 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 C7orf61Q8IZ16 206 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 TMEM86AQ8N2M4 240 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 BEND7Q8N7W2 519 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 MDM1Q8TC05 714 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ZNF483Q8TF39 744 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 UROC1Q96N76 676 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ERGIC2Q96RQ1 377 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 NECTIN3Q9NQS3 549 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 KCND1Q9NSA2 647 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 LIMD1Q9UGP4 676 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 TSPAN16Q9UKR8 245 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 CDH9Q9ULB4 789 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PPP1R3GB7ZBB8 358 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 STX16-NPEPL1H3BU86 382 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 STX16O14662 325 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ERAL1O75616 437 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 CCNDBP1O95273 360 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 CFIP05156 583 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 NR2F1P10589 423 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PAX3P23760 479 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ADCYAP1R1P41586 468 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 XKR4Q5GH76 650 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PCNX4Q63HM2 1172 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PSRC1Q6PGN9 363 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 CNSTQ6PJW8 725 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 LRIG3Q6UXM1 1119 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 METTL3Q86U44 580 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 EMC1Q8N766 993 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 TC2NQ8N9U0 490 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ACTRT2Q8TDY3 377 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SELENOMQ8WWX9 145 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 RIPOR3Q96MK2 946 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SLC4A5Q9BY07 1137 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 KBTBD4Q9NVX7 518 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 NUDT5Q9UKK9 219 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ZNF214Q9UL59 606 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 MAPRE3Q9UPY8 281 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ERVK-11Q9UQG0 969 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 TSC22D4Q9Y3Q8 395 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ABHD14A-ACY1A0A1B0GW23 586 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SLC28A1O00337 649 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 SGPL1O95470 568 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 FGF19O95750 216 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 PGK1P00558 417 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 FGBP02675 491 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ASGR1P07306 291 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ARP10275 920 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ATP5F1P24539 256 aaPredicted RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 MDH1P40925 334 aaKnown RBP5.85□□□□□ -1.47
USP38-203ENST00000511739 MAGEA9P43362 315 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ACTR3P61158 418 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 ZNF846Q147U1 533 aa5.85□□□□□ -1.47
USP38-203ENST00000511739 NOMO2Q5JPE7 1267 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms