RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, human

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-229	ENST00000510098	C10orf25	Q5T742	122 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	C1QTNF12	Q5T7M4	302 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	SPATA1	Q5VX52	437 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	AADACL2	Q6P093	401 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	BRINP3	Q76B58	766 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-229	ENST00000510098	CCDC25	Q86WR0	208 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	ANKRD13B	Q86YJ7	626 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TMEM217	Q8N7C4	229 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	ZBTB9	Q96C00	473 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	PIMREG	Q9BSJ6	248 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	NPL	Q9BXD5	320 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-229	ENST00000510098	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TAOK3	Q9H2K8	898 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TTC12	Q9H892	705 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-229	ENST00000510098		Q9N2J8	555 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	UBN1	Q9NPG3	1134 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TMEM184C	Q9NVA4	438 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TMEM45A	Q9NWC5	275 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	UPB1	Q9UBR1	384 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	CNOT7	Q9UIV1	285 aa	Known RBP	4.19	□□□□□ -1.74
CAST-229	ENST00000510098	UTS2R	Q9UKP6	389 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	TBX20	Q9UMR3	447 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	ARHGAP26	Q9UNA1	814 aa		4.19	□□□□□ -1.74
CAST-229	ENST00000510098	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.19	□□□□□ -1.74
CAST-229	ENST00000510098		A6NLC8	198 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	TMCC2	O75069	709 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	CD4	P01730	458 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	CTSA	P10619	480 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	CYP19A1	P11511	503 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-229	ENST00000510098	FCGR2A	P12318	317 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	KLRC2	P26717	231 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ELF1	P32519	619 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	KRT9	P35527	623 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	LIFR	P42702	1097 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	PMPCA	Q10713	525 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	TDG	Q13569	410 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	RBMS2	Q15434	407 aa	Known RBP	4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ALG10	Q5BKT4	473 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ALG10B	Q5I7T1	473 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	SPECC1	Q5M775	1068 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	UBE2Q1	Q7Z7E8	422 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ADGRG6	Q86SQ4	1221 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	IGFN1	Q86VF2	1251 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	GHDC	Q8N2G8	530 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	TTC30B	Q8N4P2	665 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	TCP11L2	Q8N4U5	519 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	SCAI	Q8N9R8	606 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	RFWD2	Q8NHY2	731 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	NOC3L	Q8WTT2	800 aa	Known RBP	4.18	□□□□□ -1.74
CAST-229	ENST00000510098	KAT2A	Q92830	837 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-229	ENST00000510098	TUBB6	Q9BUF5	446 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-229	ENST00000510098	AAMDC	Q9H7C9	122 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	LAMP3	Q9UQV4	416 aa		4.18	□□□□□ -1.74
CAST-229	ENST00000510098	ZMYM2	Q9UBW7	1377 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	FAM170A	A1A519	330 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	ANKRD18B	A2A2Z9	1011 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	MYMK	A6NI61	221 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	TULP3	O75386	442 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	PRF1	P14222	555 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	GJC1	P36383	396 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	GPD2	P43304	727 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	MTNR1A	P48039	350 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	TUB	P50607	506 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	RPP30	P78346	268 aa	Known RBP	4.17	□□□□□ -1.74
CAST-229	ENST00000510098	SEMA3A	Q14563	771 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	LCE1A	Q5T7P2	110 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	NAA35	Q5VZE5	725 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	TMEM268	Q5VZI3	342 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	ISM2	Q6H9L7	571 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	SLC22A25	Q6T423	547 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	DEF8	Q6ZN54	512 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	FASTKD5	Q7L8L6	764 aa	Known RBP	4.17	□□□□□ -1.74
CAST-229	ENST00000510098	CREBRF	Q8IUR6	639 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	DDIAS	Q8IXT1	998 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	NRAC	Q8N912	160 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	LSM14A	Q8ND56	463 aa	Known RBP	4.17	□□□□□ -1.74
CAST-229	ENST00000510098	IGFBPL1	Q8WX77	278 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	CNOT9	Q92600	299 aa	Known RBP	4.17	□□□□□ -1.74
CAST-229	ENST00000510098	CLMN	Q96JQ2	1002 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.17	□□□□□ -1.74
CAST-229	ENST00000510098	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.17	□□□□□ -1.74
CAST-229	ENST00000510098	ZNF304	Q9HCX3	659 aa		4.17	□□□□□ -1.74
CAST-229	ENST00000510098	KIR2DS5	A0A0G2JLQ3	304 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	OR6C68	A6NDL8	312 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	FAM90A7P	A6NKC0	464 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	FAM90A22P	A8MWA6	464 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	FAM90A12P	A8MX19	464 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	FAM90A23P	A8MXZ1	464 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	FOXO6	A8MYZ6	492 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	KIR2DS3	K7RE56	304 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	PRPF4	O43172	522 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
CAST-229	ENST00000510098	TLR2	O60603	784 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	NEURL1	O76050	574 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	DDX58	O95786	925 aa	Known RBP	4.16	□□□□□ -1.74
CAST-229	ENST00000510098	LCK	P06239	509 aa		4.16	□□□□□ -1.74
CAST-229	ENST00000510098	HSP90AB1	P08238	724 aa	Known RBP	4.16	□□□□□ -1.74
CAST-229	ENST00000510098	CD72	P21854	359 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms