RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HORMAD1Q86X24 394 aa15.72■□□□□ 0.11
TPM3-219ENST00000509409 SLC30A5Q8TAD4 765 aa15.72■□□□□ 0.11
TPM3-219ENST00000509409 HNRNPLLQ8WVV9 542 aaKnown RBP15.72■□□□□ 0.11
TPM3-219ENST00000509409 RXFP2Q8WXD0 754 aa15.72■□□□□ 0.11
TPM3-219ENST00000509409 PPP1R16AQ96I34 528 aa15.72■□□□□ 0.11
TPM3-219ENST00000509409 GANQ9H2C0 597 aa15.72■□□□□ 0.11
TPM3-219ENST00000509409 NLRC4Q9NPP4 1024 aa15.72■□□□□ 0.11
TPM3-219ENST00000509409 FAM207AQ9NSI2 230 aaPredicted RBP15.72■□□□□ 0.11
TPM3-219ENST00000509409 SDC3O75056 442 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 LEFTY1O75610 366 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 SDC4P31431 198 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 HNF1BP35680 557 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 SOX5P35711 763 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 STAT1P42224 750 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 CDR2Q01850 454 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 GNA12Q03113 381 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 KRT31Q15323 416 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 C15orf59Q2T9L4 293 aaPredicted RBP15.71■□□□□ 0.11
TPM3-219ENST00000509409 CARD16Q5EG05 197 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 ARCQ7LC44 396 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 RYBPQ8N488 228 aaPredicted RBP15.71■□□□□ 0.11
TPM3-219ENST00000509409 HEPHQ9BQS7 1158 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 C11orf70Q9BRQ4 267 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 FZD3Q9NPG1 666 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 PPARGC1AQ9UBK2 798 aaKnown RBP15.71■□□□□ 0.11
TPM3-219ENST00000509409 OR12D3Q9UGF7 316 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 GPSM3Q9Y4H4 160 aa15.71■□□□□ 0.11
TPM3-219ENST00000509409 TMEM131Q92545 1883 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 CYP1A1P04798 512 aaPredicted RBP15.7■□□□□ 0.1
TPM3-219ENST00000509409 CKMT2P17540 419 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 ADRA1BP35368 520 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 SERPINH1P50454 418 aaKnown RBP15.7■□□□□ 0.1
TPM3-219ENST00000509409 CLDN6P56747 220 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 FMO1Q01740 532 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 CAMK2BQ13554 666 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 ZNF284Q2VY69 593 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 CCDC14Q49A88 953 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 RAB6CQ53S08 254 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 FBXL19Q6PCT2 694 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 BNIPLQ7Z465 357 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 PCDH20Q8N6Y1 951 aaKnown RBP15.7■□□□□ 0.1
TPM3-219ENST00000509409 ANKRD20A12PQ8NF67 263 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 FEM1CQ96JP0 617 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 CALN1Q9BXU9 219 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 RAB6CQ9H0N0 254 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 LMBRD1Q9NUN5 540 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 SEPT11Q9NVA2 429 aaKnown RBP15.7■□□□□ 0.1
TPM3-219ENST00000509409 FANCLQ9NW38 375 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 NOCTQ9UK39 431 aaKnown RBP15.7■□□□□ 0.1
TPM3-219ENST00000509409 HPCAL4Q9UM19 191 aa15.7■□□□□ 0.1
TPM3-219ENST00000509409 FCF1Q9Y324 198 aaKnown RBP15.7■□□□□ 0.1
TPM3-219ENST00000509409 PLXNA2O75051 1894 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 RNF103O00237 685 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ZMPSTE24O75844 475 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 GJB6O95452 261 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 CHRNB2P17787 502 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
TPM3-219ENST00000509409 HNRNPA2B1P22626 353 aaKnown RBP15.69■□□□□ 0.1
TPM3-219ENST00000509409 MMP8P22894 467 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ACVRL1P37023 503 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ACADVLP49748 655 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 NEK3P51956 506 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 CLDN2P57739 230 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 SYCP1Q15431 976 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 COL28A1Q2UY09 1125 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 SEL1L3Q68CR1 1132 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 TRIM72Q6ZMU5 477 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ZNF354CQ86Y25 554 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 NEK11Q8NG66 645 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 JOSD2Q8TAC2 188 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 GPT2Q8TD30 523 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 SELENOOQ9BVL4 669 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 OSBPL2Q9H1P3 480 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ZDHHC6Q9H6R6 413 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 KLHL11Q9NVR0 708 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ADAM22Q9P0K1 906 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 HECAQ9UBI9 543 aaPredicted RBP15.69■□□□□ 0.1
TPM3-219ENST00000509409 DKK4Q9UBT3 224 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 DNAI1Q9UI46 699 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 ZFR2Q9UPR6 939 aaKnown RBP15.69■□□□□ 0.1
TPM3-219ENST00000509409 ACTL7AQ9Y615 435 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 AK5Q9Y6K8 562 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 WASF2Q9Y6W5 498 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 FAM208BQ5VWN6 2430 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 FREM2Q5SZK8 3169 aa15.69■□□□□ 0.1
TPM3-219ENST00000509409 PLXNB3Q9ULL4 1909 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 GOLGA4Q13439 2230 aaKnown RBP15.68■□□□□ 0.1
TPM3-219ENST00000509409 ZNF821O75541 412 aaPredicted RBP15.68■□□□□ 0.1
TPM3-219ENST00000509409 PLEKP08567 350 aaPredicted RBP15.68■□□□□ 0.1
TPM3-219ENST00000509409 KRT3P12035 628 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 RHOQP17081 205 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 L1CAMP32004 1257 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 ETFBP38117 255 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 NSFP46459 744 aaKnown RBP15.68■□□□□ 0.1
TPM3-219ENST00000509409 CCNHP51946 323 aaPredicted RBP15.68■□□□□ 0.1
TPM3-219ENST00000509409 RPS21P63220 83 aaKnown RBP15.68■□□□□ 0.1
TPM3-219ENST00000509409 ARF5P84085 180 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 DAB2P98082 770 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms