RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 HCN4Q9Y3Q4 1203 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 IKBKGQ9Y6K9 419 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
NR1I3-226ENST00000508740 MAGEB16A2A368 324 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 F5H5T6 163 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 AP3B1O00203 1094 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 NDUFAB1O14561 156 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TLL1O43897 1013 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 RAMP2O60895 175 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 USP12O75317 370 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 SPAG7O75391 227 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 ANXA9O76027 345 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 CXCL14O95715 111 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 FAM107AO95990 144 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 PEX11BO96011 259 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 OAS1P00973 400 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 MT-ND3P03897 115 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 F11P03951 625 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 HLA-DQB2P05538 268 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 LINC00271P0C7V0 271 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 MAPKAPK2P49137 400 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 SLC11A2P49281 568 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 RENBPP51606 427 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 YBEYP58557 167 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 CRADDP78560 199 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 OLIG2Q13516 323 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 HNRNPDQ14103 355 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 LRRC14Q15048 493 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 POLD3Q15054 466 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 PARP15Q460N3 678 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 FAM133BQ5BKY9 247 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 SPANXN3Q5MJ09 141 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TMEM240Q5SV17 173 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 LGSNQ5TDP6 509 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TTC39BQ5VTQ0 682 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TRMT10BQ6PF06 316 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 FOXR1Q6PIV2 292 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 BRICD5Q6PL45 260 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 LINC00523Q86TU6 105 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 ITIH5Q86UX2 942 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 RETREG3Q86VR2 466 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 LGI2Q8N0V4 545 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 C4orf33Q8N1A6 199 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TEX26Q8N6G2 289 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 ANKRD42Q8N9B4 389 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 DNAAF3Q8N9W5 541 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 MGARPQ8TDB4 240 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 DENND1AQ8TEH3 1009 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 DYDC1Q8WWB3 177 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 CLP1Q92989 425 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 PSMG2Q969U7 264 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 ZNF317Q96PQ6 595 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 TRIM56Q9BRZ2 755 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 KLF16Q9BXK1 252 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 RNF38Q9H0F5 515 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 SLC25A51Q9H1U9 297 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 KIF9Q9HAQ2 790 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 GKN1Q9NS71 199 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 PIH1D1Q9NWS0 290 aaKnown RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 UBP1Q9NZI7 540 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 UXTQ9UBK9 157 aaPredicted RBP8.1□□□□□ -1.11
NR1I3-226ENST00000508740 INSL6Q9Y581 213 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 INSL5Q9Y5Q6 135 aa8.1□□□□□ -1.11
NR1I3-226ENST00000508740 C2orf78A6NCI8 922 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 J3KR12 359 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 TGM5O43548 720 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 TYROBPO43914 113 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 UGT1A9O60656 530 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 FAM155BO75949 473 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 NEBLO76041 1014 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 STC2O76061 302 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 ASMTLO95671 621 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 KLKB1P03952 638 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 POLBP06746 335 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 SNRPAP09012 282 aaKnown RBP8.09□□□□□ -1.11
NR1I3-226ENST00000508740 CNPP09543 421 aaKnown RBP8.09□□□□□ -1.11
NR1I3-226ENST00000508740 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 KRT4P19013 534 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 DRD4P21917 467 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 OR1E1P30953 314 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 CORO1AP31146 461 aaKnown RBP8.09□□□□□ -1.11
NR1I3-226ENST00000508740 SLC6A4P31645 630 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 ADRA1AP35348 466 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 GEMP55040 296 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 CDH4P55283 916 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 HNRNPH2P55795 449 aaKnown RBP8.09□□□□□ -1.11
NR1I3-226ENST00000508740 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
NR1I3-226ENST00000508740 SLC18A2Q05940 514 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 TNK2Q07912 1038 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 IL10RBQ08334 325 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 MGAT5Q09328 741 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 CDH17Q12864 832 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 NAB1Q13506 487 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 SERINC3Q13530 473 aa8.09□□□□□ -1.11
NR1I3-226ENST00000508740 FRG1Q14331 258 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms