RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 NUCB2P80303 420 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 MRPS21P82921 87 aaKnown RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CETN1Q12798 172 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 HNRNPDQ14103 355 aaKnown RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZBTB6Q15916 424 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CCDC6Q16204 474 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 IL17AQ16552 155 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 SGSM1Q2NKQ1 1148 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 VMACQ2NL98 169 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CFAP221Q4G0U5 840 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 TMEM196Q5HYL7 178 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CT47A1Q5JQC4 288 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 WDR45BQ5MNZ6 344 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 FAM26FQ5R3K3 315 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 C10orf76Q5T2E6 689 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 HECTD3Q5T447 861 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 STPG1Q5TH74 334 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 SDHAF4Q5VUM1 108 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 LYSMD4Q5XG99 296 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 TRIM68Q6AZZ1 485 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 LIPIQ6XZB0 460 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 Q6ZS52 159 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 GAREM2Q75VX8 874 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 FILIP1Q7Z7B0 1213 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 TMC8Q8IU68 726 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 NELFCDQ8IXH7 590 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 EFCAB13Q8IY85 973 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CHPFQ8IZ52 775 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 MAML2Q8IZL2 1156 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 NUP93Q8N1F7 819 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 ARHGAP18Q8N392 663 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 TTC39CQ8N584 583 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 OR10T2Q8NGX3 314 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CEP76Q8TAP6 659 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 FEZF2Q8TBJ5 459 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 MYCBPAPQ8TBZ2 947 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 FNIP1Q8TF40 1166 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 HMGB4Q8WW32 186 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 USP13Q92995 863 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 MYLPFQ96A32 169 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 SKA1Q96BD8 255 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 OTUB2Q96DC9 234 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 SMARCD1Q96GM5 515 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 SPATA17Q96L03 361 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 TSG101Q99816 390 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 PDE11AQ9HCR9 933 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 SLC39A2Q9NP94 309 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 DMAP1Q9NPF5 467 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 TLR8Q9NR97 1041 aaKnown RBP3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 INTS13Q9NVM9 706 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 GDAP2Q9NXN4 497 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 HSPBP1Q9NZL4 362 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CFAP97Q9P2B7 532 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 WDR35Q9P2L0 1181 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 ARHGAP26Q9UNA1 814 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CPQQ9Y646 472 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CLIC4Q9Y696 253 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 WNT6Q9Y6F9 365 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 C5orf42Q9H799 3197 aa3.96□□□□□ -1.78
HMGN1P11-201ENST00000508668 CITO14578 2027 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SPTBN4Q9H254 2564 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TCRBV21S2A2A0A5A6 115 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 C4orf47A7E2U8 309 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 F8VP50 259 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 LEFTY2O00292 366 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 PPEF2O14830 753 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 EIF3DO15371 548 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 POLR2DO15514 142 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 OPHN1O60890 802 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 PPP6R2O75170 966 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 NOL4O94818 638 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KAT7O95251 611 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KLF8O95600 359 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 RPN1P04843 607 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 MMEP08473 750 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ENO2P09104 434 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 FAM163BP0C2L3 166 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 FAM200BP0CF97 657 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 IRF1P10914 325 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 HOXB2P14652 356 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ARSAP15289 507 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SLC9A1P19634 815 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SYT1P21579 422 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 WARSP23381 471 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 MC4RP32245 332 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ATP5C1P36542 298 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 PIK3CAP42336 1068 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TNFRSF4P43489 277 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 GLRBP48167 497 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SCNN1BP51168 640 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 AFF3P51826 1226 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 LIMK1P53667 647 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 IL2P60568 153 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 NOP14P78316 857 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 KDSRQ06136 332 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 DBPQ10586 325 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 TAF10Q12962 218 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 SRSF5Q13243 272 aaKnown RBP3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 ADAM9Q13443 819 aa3.95□□□□□ -1.78
HMGN1P11-201ENST00000508668 STIM1Q13586 685 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms