RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 CWH43Q9H720 699 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 ZMAT3Q9HA38 289 aaKnown RBP3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 ATP6V0A4Q9HBG4 840 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 GPR35Q9HC97 309 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 CASS4Q9NQ75 786 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 CHST12Q9NRB3 414 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 RLIMQ9NVW2 624 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 GOLGA6AQ9NYA3 693 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 SUCLA2Q9P2R7 463 aaPredicted RBP3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 ZDHHC8Q9ULC8 765 aa3.84□□□□□ -1.79
UBE2D3-226ENST00000508635 RALGAPA2Q2PPJ7 1873 aa3.84□□□□□ -1.8
UBE2D3-226ENST00000508635 PRAMEF33A0A0G2JMD5 474 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 A0A1W2PPL8 197 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 PIPSLA2A3N6 862 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 PI4K2BG5E9Z4 385 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 LINC01565O15544 149 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 MARCH6O60337 910 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 PRAMEF10O60809 474 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 DKC1O60832 514 aaKnown RBP eCLIP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TBX10O75333 385 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 FGF18O76093 207 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 UNC5CO95185 931 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CSPG5O95196 566 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 LYPLA2O95372 231 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 EGR2P11161 476 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ATF7P17544 494 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 KRT4P19013 534 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 SFPQP23246 707 aaKnown RBP eCLIP3.83□□□□□ -1.83e-6■□□□□ 10.5
UBE2D3-226ENST00000508635 YWHABP31946 246 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TOB1P50616 345 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 POLGP54098 1239 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CYP4A11Q02928 519 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 UBE3AQ05086 875 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TRIM29Q14134 588 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CTTNQ14247 550 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 EMC2Q15006 297 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CALCRLQ16602 461 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 GFOD2Q3B7J2 385 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ANO6Q4KMQ2 910 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CLLU1OSQ5K130 101 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 SPOUT1Q5T280 376 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 NCAPH2Q6IBW4 605 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 PPP4R4Q6NUP7 873 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ARMC6Q6NXE6 501 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 OTUD6AQ7L8S5 288 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ADGRD2Q7Z7M1 963 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ZNF410Q86VK4 478 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 RHPN2Q8IUC4 686 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 EXOC8Q8IYI6 725 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 COLGALT2Q8IYK4 626 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 THNSL1Q8IYQ7 743 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ULK2Q8IYT8 1036 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 LRRC43Q8N309 656 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 C4orf32Q8N8J7 132 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 COLGALT1Q8NBJ5 622 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 BEND2Q8NDZ0 799 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 PRPF31Q8WWY3 499 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CAVIN3Q969G5 261 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TMEM143Q96AN5 459 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 SCLT1Q96NL6 688 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 HSD17B14Q9BPX1 270 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 JPH2Q9BR39 696 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 LXNQ9BS40 222 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 CNPPD1Q9BV87 410 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 INO80BQ9C086 356 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TTYH3Q9C0H2 523 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 DHX33Q9H6R0 707 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TTC12Q9H892 705 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TMEM74BQ9NUR3 256 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TBCCD1Q9NVR7 557 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 OBP2AQ9NY56 170 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ETAA1Q9NY74 926 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 DACT1Q9NYF0 836 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 PCDHA12Q9UN75 941 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 LZTS1Q9Y250 596 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TNFRSF18Q9Y5U5 241 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TTC3P53804 2025 aa3.83□□□□□ -1.8
UBE2D3-226ENST00000508635 TCHHQ07283 1943 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 LOXHD1Q8IVV2 1947 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 NLRC5Q86WI3 1866 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 A0A087WWV3 80 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 A0A1W2PS29 197 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 CFAP69A5D8W1 941 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 CAPN8A6NHC0 703 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 HIDE1A8MVS5 230 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 PER2O15055 1255 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 ASAP2O43150 1006 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 MBTPS2O43462 519 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 NEMFO60524 1076 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 DNAJB5O75953 348 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 GLP2RO95838 553 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 XRCC6P12956 609 aaKnown RBP eCLIP3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 GATA3P23771 443 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 GJB2P29033 226 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 HOXA11P31270 313 aaPredicted RBP3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 ARL2P36404 184 aa3.82□□□□□ -1.8
UBE2D3-226ENST00000508635 PLA2G5P39877 138 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms