RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 OR6B3Q8NGW1 331 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 IRGQQ8WZA9 623 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 STAMBPL1Q96FJ0 436 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 OXNAD1Q96HP4 312 aaPredicted RBP9.01□□□□□ -0.97
CASC9-201ENST00000504531 YIPF2Q9BWQ6 316 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 PLAC1Q9HBJ0 212 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 CNGB3Q9NQW8 809 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 CHST12Q9NRB3 414 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 NSMCE4AQ9NXX6 385 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 SNTG2Q9NY99 539 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 HEY2Q9UBP5 337 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 HAO1Q9UJM8 370 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 HEY1Q9Y5J3 304 aa9.01□□□□□ -0.97
CASC9-201ENST00000504531 CAPN14A8MX76 684 aa9□□□□□ -0.97
CASC9-201ENST00000504531 PDHXO00330 501 aa9□□□□□ -0.97
CASC9-201ENST00000504531 PEX11AO75192 247 aa9□□□□□ -0.97
CASC9-201ENST00000504531 H2AFYO75367 372 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 BANF1O75531 89 aa9□□□□□ -0.97
CASC9-201ENST00000504531 RECQL4O94761 1208 aa9□□□□□ -0.97
CASC9-201ENST00000504531 KLHL2O95198 593 aa9□□□□□ -0.97
CASC9-201ENST00000504531 POLBP06746 335 aa9□□□□□ -0.97
CASC9-201ENST00000504531 SERPINA6P08185 405 aa9□□□□□ -0.97
CASC9-201ENST00000504531 TPBGLP0DKB5 382 aa9□□□□□ -0.97
CASC9-201ENST00000504531 RARBP10826 455 aa9□□□□□ -0.97
CASC9-201ENST00000504531 ADH5P11766 374 aa9□□□□□ -0.97
CASC9-201ENST00000504531 ALOX15P16050 662 aaPredicted RBP9□□□□□ -0.97
CASC9-201ENST00000504531 GARSP41250 739 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 NPY2RP49146 381 aa9□□□□□ -0.97
CASC9-201ENST00000504531 MRPS5P82675 430 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 SLC10A2Q12908 348 aaPredicted RBP9□□□□□ -0.97
CASC9-201ENST00000504531 SEMA3BQ13214 749 aa9□□□□□ -0.97
CASC9-201ENST00000504531 EFTUD2Q15029 972 aaKnown RBP eCLIP9□□□□□ -0.97
CASC9-201ENST00000504531 CA9Q16790 459 aa9□□□□□ -0.97
CASC9-201ENST00000504531 TEX44Q53QW1 395 aa9□□□□□ -0.97
CASC9-201ENST00000504531 METTL21CQ5VZV1 264 aa9□□□□□ -0.97
CASC9-201ENST00000504531 GPR142Q7Z601 462 aa9□□□□□ -0.97
CASC9-201ENST00000504531 DPP9Q86TI2 863 aa9□□□□□ -0.97
CASC9-201ENST00000504531 PRPF39Q86UA1 669 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 LONP2Q86WA8 852 aa9□□□□□ -0.97
CASC9-201ENST00000504531 NUDCD3Q8IVD9 361 aa9□□□□□ -0.97
CASC9-201ENST00000504531 CTAGE3PQ8IX95 158 aa9□□□□□ -0.97
CASC9-201ENST00000504531 STKLD1Q8NE28 680 aa9□□□□□ -0.97
CASC9-201ENST00000504531 OR6Y1Q8NGX8 325 aa9□□□□□ -0.97
CASC9-201ENST00000504531 NSMCE1Q8WV22 266 aa9□□□□□ -0.97
CASC9-201ENST00000504531 FAM111AQ96PZ2 611 aa9□□□□□ -0.97
CASC9-201ENST00000504531 PARK7Q99497 189 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 CPNE1Q99829 537 aa9□□□□□ -0.97
CASC9-201ENST00000504531 TRIM6Q9C030 488 aaPredicted RBP9□□□□□ -0.97
CASC9-201ENST00000504531 DHX35Q9H5Z1 703 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 MRM3Q9HC36 420 aaKnown RBP9□□□□□ -0.97
CASC9-201ENST00000504531 MRGBPQ9NV56 204 aa9□□□□□ -0.97
CASC9-201ENST00000504531 MID2Q9UJV3 735 aa9□□□□□ -0.97
CASC9-201ENST00000504531 PTCH2Q9Y6C5 1203 aa9□□□□□ -0.97
CASC9-201ENST00000504531 COL4A4P53420 1690 aaPredicted RBP9□□□□□ -0.97
CASC9-201ENST00000504531 SCN1AP35498 2009 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 DCLK1O15075 740 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 SLC22A2O15244 555 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 METTL18O95568 372 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 APOA4P06727 396 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 SMIM10L2AP0DMW4 78 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 SMIM10L2BP0DMW5 78 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 NEFHP12036 1026 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 PTPN1P18031 435 aaKnown RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 AOC1P19801 751 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 ARNTP27540 789 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 PRDX6P30041 224 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 ADSLP30566 484 aaPredicted RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 ADRA1BP35368 520 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 RGS7P49802 495 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 CPT1AP50416 773 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 CSE1LP55060 971 aaKnown RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 LILRA4P59901 499 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 PPARDQ03181 441 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 ZBTB16Q05516 673 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 PPIDQ08752 370 aaKnown RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 ADCY1Q08828 1119 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 STX3Q13277 289 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 CRHR2Q13324 411 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 DPYSQ14117 519 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 SNX17Q15036 470 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 CDO1Q16878 200 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 RAB41Q5JT25 222 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 UBXN11Q5T124 520 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 OLFML2BQ68BL8 750 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 ADGRG6Q86SQ4 1221 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 TMEM135Q86UB9 458 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 LRRC49Q8IUZ0 686 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 WDR75Q8IWA0 830 aaKnown RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 COLGALT1Q8NBJ5 622 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 B3GALNT2Q8NCR0 500 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 RFWD2Q8NHY2 731 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 CCDC110Q8TBZ0 833 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 RNF139Q8WU17 664 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 PTPRN2Q92932 1015 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 PIWIL1Q96J94 861 aaKnown RBP8.99□□□□□ -0.97
CASC9-201ENST00000504531 FAM83CQ9BQN1 747 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 TMEM120AQ9BXJ8 343 aa8.99□□□□□ -0.97
CASC9-201ENST00000504531 CXorf56Q9H5V9 222 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms