RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 MFSD11O43934 449 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PRAMEF11O60813 436 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 ALDH1A2O94788 518 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 APBB3O95704 486 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 COL9A1P20849 921 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PTPN7P35236 360 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 CETN2P41208 172 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 IL10RBQ08334 325 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 ANGPT1Q15389 498 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 DLG2Q15700 870 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 INO80DQ53TQ3 878 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 MEI1Q5TIA1 1274 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 KIAA1211LQ6NV74 962 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 LINGO4Q6UY18 593 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 RASSF3Q86WH2 238 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF354CQ86Y25 554 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 CCDC50Q8IVM0 306 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 TP53INP2Q8IXH6 220 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PLD5Q8N7P1 536 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 TSTD1Q8NFU3 115 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 NELL1Q92832 810 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PTPRN2Q92932 1015 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 ISG20Q96AZ6 181 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 FAM126AQ9BYI3 521 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 CEP44Q9C0F1 390 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PDFQ9HBH1 243 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PRSS16Q9NQE7 514 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 KCND1Q9NSA2 647 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 TRMT1Q9NXH9 659 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 EBF1Q9UH73 591 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 IPO11Q9UI26 975 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 PACSIN2Q9UNF0 486 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
PDLIM5-208ENST00000504489 J3KR12 359 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 K7ERQ8 282 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 ZBTB24O43167 697 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 CST8O60676 142 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 SIN3BO75182 1162 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 PYGMP11217 842 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 KRT10P13645 584 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 NR2C2P49116 596 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 NRLP54845 237 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 GBE1Q04446 702 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 CSTF1Q05048 431 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 GALNT2Q10471 571 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 SLC10A2Q12908 348 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 RPS6KA1Q15418 735 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 C9orf64Q5T6V5 341 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 PCDH20Q8N6Y1 951 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 NETO2Q8NC67 525 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 OR2T3Q8NH03 318 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 TSGA13Q96PP4 275 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 HHIPQ96QV1 700 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 OSBPL8Q9BZF1 889 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 DTLQ9NZJ0 730 aa12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 UBA2Q9UBT2 640 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-208ENST00000504489 MUC6Q6W4X9 2439 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 TCRBV21S2A2A0A5A6 115 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 ALOX15BO15296 676 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 MAFKO60675 156 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 ZNF821O75541 412 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 SP9P0CG40 484 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 VAV1P15498 845 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 GABRG2P18507 467 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 MX2P20592 715 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 TGM2P21980 687 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 GARSP41250 739 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 COPAP53621 1224 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 RFTN1Q14699 578 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 DCAF12L1Q5VU92 463 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 KAZNQ674X7 775 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 C22orf39Q6P5X5 142 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 TSSK4Q6SA08 328 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 BBS12Q6ZW61 710 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 ATPAF2Q8N5M1 289 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 FATE1Q969F0 183 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 MRGPRX1Q96LB2 322 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 RSPH9Q9H1X1 276 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 MTG2Q9H4K7 406 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 SP110Q9HB58 689 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 HEY1Q9Y5J3 304 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 ACTL7AQ9Y615 435 aa12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 TP53BP1Q12888 1972 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-208ENST00000504489 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 MCF2LO15068 1137 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 AXIN1O15169 862 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 KIF5CO60282 957 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 TMCC1O94876 653 aa12.11□□□□□ -0.47
PDLIM5-208ENST00000504489 TJP3O95049 919 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms