RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.33
TRIM27-207ENST00000498117 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
TRIM27-207ENST00000498117 STRADBQ9C0K7 418 aa12.96□□□□□ -0.33
TRIM27-207ENST00000498117 SYNDIG1Q9H7V2 258 aa12.96□□□□□ -0.33
TRIM27-207ENST00000498117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.339e-8■■■■■ 41.3
TRIM27-207ENST00000498117 GEMIN8Q9NWZ8 242 aaKnown RBP12.96□□□□□ -0.33
TRIM27-207ENST00000498117 KLF15Q9UIH9 416 aa12.96□□□□□ -0.33
TRIM27-207ENST00000498117 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.33
TRIM27-207ENST00000498117 KCNU1A8MYU2 1149 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 M0QYV0 167 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 LIPCP11150 499 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 UGT1A5P35504 534 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 ME1P48163 572 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 SRSF6Q13247 344 aaKnown RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 PDE1CQ14123 709 aaPredicted RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 DRAP1Q14919 205 aaPredicted RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 KIAA1161Q6NSJ0 714 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 CIR1Q86X95 450 aaPredicted RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 SLC35F3Q8IY50 421 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 OR2A12Q8NGT7 310 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 PRMT1Q99873 361 aaKnown RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 EPB41L5Q9HCM4 733 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 VPS28Q9UK41 221 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 PADI4Q9UM07 663 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 MAPK8IP1Q9UQF2 711 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 HS3ST2Q9Y278 367 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 COQ4Q9Y3A0 265 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 NBASA2RRP1 2371 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 COL27A1Q8IZC6 1860 aaPredicted RBP12.95□□□□□ -0.34
TRIM27-207ENST00000498117 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 TRPM6Q9BX84 2022 aa12.95□□□□□ -0.34
TRIM27-207ENST00000498117 LMO7DNF2Z398 122 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 FPGTO14772 594 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
TRIM27-207ENST00000498117 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
TRIM27-207ENST00000498117 ANXA6P08133 673 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 SLC2A3P11169 496 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 EPB41P11171 864 aaKnown RBP12.94□□□□□ -0.34
TRIM27-207ENST00000498117 SRCP12931 536 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 KRT83P78385 493 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 SGCGQ13326 291 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 MORC3Q14149 939 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 C4orf17Q53FE4 359 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 ZSCAN30Q86W11 494 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 GUF1Q8N442 669 aaKnown RBP12.94□□□□□ -0.34
TRIM27-207ENST00000498117 UBR7Q8N806 425 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 ATP11CQ8NB49 1132 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 RPRD1AQ96P16 312 aaPredicted RBP12.94□□□□□ -0.34
TRIM27-207ENST00000498117 LENG8Q96PV6 779 aaPredicted RBP12.94□□□□□ -0.34
TRIM27-207ENST00000498117 ADNPQ9H2P0 1102 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 PCDHB11Q9Y5F2 797 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 OR51B4Q9Y5P0 310 aa12.94□□□□□ -0.34
TRIM27-207ENST00000498117 USP9YO00507 2555 aaPredicted RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 CASC3O15234 703 aaKnown RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 RAD51BO15315 384 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 RHOBTB3O94955 611 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 MT-CO1P00395 513 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 JMJD7P0C870 316 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 ACADSBP45954 432 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 RECQLP46063 649 aaPredicted RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 EIF2B5Q13144 721 aaKnown RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 FGL2Q14314 439 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 PRRT3Q5FWE3 981 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 ARSIQ5FYB1 569 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 TBATAQ96M53 351 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 TMEM74Q96NL1 305 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 MUC3BQ9H195 1237 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 ST7Q9NRC1 585 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 PISDQ9UG56 409 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 APOBEC3BQ9UH17 382 aaKnown RBP12.93□□□□□ -0.34
TRIM27-207ENST00000498117 IL36AQ9UHA7 158 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 USP25Q9UHP3 1055 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 PCDHB4Q9Y5E5 795 aa12.93□□□□□ -0.34
TRIM27-207ENST00000498117 CETN3O15182 167 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 SPINT1O43278 529 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 CLDN11O75508 207 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 GCATO75600 419 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 IGLV3-25P01717 112 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 HGFP14210 728 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 BRD2P25440 801 aaKnown RBP12.92□□□□□ -0.34
TRIM27-207ENST00000498117 CCR1P32246 355 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 NOS2P35228 1153 aa12.92□□□□□ -0.34
TRIM27-207ENST00000498117 RPL34P49207 117 aaKnown RBP12.92□□□□□ -0.34
TRIM27-207ENST00000498117 NEK3P51956 506 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms