RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 RPS3AP61247 264 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RPP30P78346 268 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ATP2C1P98194 919 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SATB1Q01826 763 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 BFSP1Q12934 665 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 MPP3Q13368 585 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PPIGQ13427 754 aaKnown RBP eCLIP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 BAATQ14032 418 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 VGLL4Q14135 290 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 HLXQ14774 488 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ANGPT1Q15389 498 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 CCDC92Q53HC0 331 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RILPL1Q5EBL4 403 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RAB41Q5JT25 222 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ATXN7L2Q5T6C5 722 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PHF19Q5T6S3 580 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ANKS6Q68DC2 871 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 HMBOX1Q6NT76 420 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 TATDN1Q6P1N9 297 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 TRMT10BQ6PF06 316 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 KLHL24Q6TFL4 600 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 IL27RAQ6UWB1 636 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 MED25Q71SY5 747 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RRAGAQ7L523 313 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 UBE3BQ7Z3V4 1068 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 FAM83AQ86UY5 434 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 TTC30AQ86WT1 665 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZNF713Q8N859 430 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PSD4Q8NDX1 1056 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 BEND2Q8NDZ0 799 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 FLCNQ8NFG4 579 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 TOR1AIP2Q8NFQ8 470 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 FBXO18Q8NFZ0 1043 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RFWD2Q8NHY2 731 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 MZB1Q8WU39 189 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 GLMPQ8WWB7 406 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ARHGEF2Q92974 986 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 CUL5Q93034 780 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 GRAMD1AQ96CP6 724 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ARSGQ96EG1 525 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PRR11Q96HE9 360 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PGAM5Q96HS1 289 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZBED3Q96IU2 234 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 FAM84BQ96KN1 310 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PIGSQ96S52 555 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 PARK7Q99497 189 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SMOQ99835 787 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SYT3Q9BQG1 590 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 CLSTN3Q9BQT9 956 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 GPATCH1Q9BRR8 931 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 MECRQ9BV79 373 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 HERC2P3Q9BVR0 1158 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 VN1R3Q9BXE9 311 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 MRPL1Q9BYD6 325 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RABEP2Q9H5N1 569 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 STN1Q9H668 368 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZWILCHQ9H900 591 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 GCM1Q9NP62 436 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 EIF2B3Q9NR50 452 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SEPT11Q9NVA2 429 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SUCLA2Q9P2R7 463 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZHX1Q9UKY1 873 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SARDHQ9UL12 918 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 NDRG4Q9ULP0 352 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 NIP7Q9Y221 180 aaKnown RBP eCLIP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 RCE1Q9Y256 329 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 DRG1Q9Y295 367 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SSX2IPQ9Y2D8 614 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 ENTPD2Q9Y5L3 495 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 R4GN57 208 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 COL6A6A6NMZ7 2263 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 OTOGQ6ZRI0 2925 aa2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 SPTBN1Q01082 2364 aaKnown RBP2.63□□□□□ -1.99
CKS1BP2-201ENST00000497342 CABIN1Q9Y6J0 2220 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 HEG1Q9ULI3 1381 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 PDZD2O15018 2839 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 CCDC168Q8NDH2 2452 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 MYOCOSA0A1B0GUC4 107 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 A0A1B0GUL7 405 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 C17orf113A0A1B0GUU1 675 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 A0A1W2PRG0 241 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 CCDC151A5D8V7 595 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 C3orf70A6NLC5 250 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 DRGXA6NNA5 263 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 MARCH11A6NNE9 402 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 BTBD11A6QL63 1104 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 LOC730098B7Z3J9 87 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 KIF28PB7ZC32 967 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 DIRC3C9JPN6 131 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 TSPAN4O14817 238 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 SCAMP1O15126 338 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZSCAN9O15535 394 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 SLC7A4O43246 635 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 ADAM20O43506 726 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 GJB3O75712 270 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 BEST1O76090 585 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 SUN1O94901 812 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 WDR47O94967 919 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 TJP3O95049 919 aa2.62□□□□□ -1.99
CKS1BP2-201ENST00000497342 HSPA4LO95757 839 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms