RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 MCUQ8NE86 351 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 SH3RF2Q8TEC5 729 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.14□□□□□ -0.47
HCN3-204ENST00000496230 LRRC40Q9H9A6 602 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 BPIFA1Q9NP55 256 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 DSEQ9UL01 958 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.14□□□□□ -0.47
HCN3-204ENST00000496230 C2orf78A6NCI8 922 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 HACD1B0YJ81 288 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 E9PBE3 544 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 KLHL41O60662 606 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 HAUS5O94927 633 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
HCN3-204ENST00000496230 GALTP07902 379 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 HDCP19113 662 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 MSX2P35548 267 aaPredicted RBP12.14□□□□□ -0.47
HCN3-204ENST00000496230 WNT3AP56704 352 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 IHHQ14623 411 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 MAPRE1Q15691 268 aaKnown RBP12.14□□□□□ -0.47
HCN3-204ENST00000496230 NXNQ6DKJ4 435 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 MYLIPQ8WY64 445 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 ABCG8Q9H221 673 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
HCN3-204ENST00000496230 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
HCN3-204ENST00000496230 TDRD15B5MCY1 1934 aaKnown RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 SDK1Q7Z5N4 2213 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 MTMR11A4FU01 709 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 TOMM70O94826 608 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 AHSGP02765 367 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 CHRNGP07510 517 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 MLLT6P55198 1093 aaPredicted RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 MON1AQ86VX9 555 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 EFHBQ8N7U6 833 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 PHF21BQ96EK2 531 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 PKMYT1Q99640 499 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 GBA3Q9H227 469 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 UXTQ9UBK9 157 aaPredicted RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 ZCWPW2A0A1B0GU75 182 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 TM9SF1O15321 606 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 C2P06681 752 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 ARRB2P32121 409 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SGSHP51688 502 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 GALNT2Q10471 571 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 BNIP1Q12981 228 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 THOC5Q13769 683 aaKnown RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 POLD3Q15054 466 aaPredicted RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SH2D5Q6ZV89 423 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 TTC8Q8TAM2 541 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 CCDC124Q96CT7 223 aaKnown RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 VPS39Q96JC1 886 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 CASD1Q96PB1 797 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SEMA3CQ99985 751 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 TBL1YQ9BQ87 522 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 WDR55Q9H6Y2 383 aaPredicted RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SLC12A4Q9UP95 1085 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 PRRG1O14668 218 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 T-ENOLP0DO92 83 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 MAP2K2P36507 400 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 CSHL1Q14406 222 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SNCBQ16143 134 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 MARC1Q5VT66 337 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 CLNKQ7Z7G1 428 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 RPAINQ86UA6 219 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 RMDN1Q96DB5 314 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 CATSPERBQ9H7T0 1116 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
HCN3-204ENST00000496230 KCNK13Q9HB14 408 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 GLOD4Q9HC38 313 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 MARCH5Q9NX47 278 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 TLK1Q9UKI8 766 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 EMCNQ9ULC0 261 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 ARL5AQ9Y689 179 aa12.13□□□□□ -0.47
HCN3-204ENST00000496230 SPTBN5Q9NRC6 3674 aaKnown RBP12.12□□□□□ -0.47
HCN3-204ENST00000496230 FCHO1O14526 889 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 ATF6P18850 670 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 MAGEA3P43357 314 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 NAGLUP54802 743 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 DSC1Q08554 894 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 CDH17Q12864 832 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 RBM20Q5T481 1227 aaKnown RBP12.12□□□□□ -0.47
HCN3-204ENST00000496230 TEDDM1Q5T9Z0 273 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 ITPRIPL1Q6GPH6 555 aa12.12□□□□□ -0.47
HCN3-204ENST00000496230 NAPRTQ6XQN6 538 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms