RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SEPHS1P49903 392 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 BCAT1P54687 386 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 YWHAGP61981 247 aaKnown RBP eCLIP8.44□□□□□ -1.06
RIF1-211ENST00000494333 CYP4F3Q08477 520 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 BST2Q10589 180 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 PUM1Q14671 1186 aaKnown RBP eCLIP8.44□□□□□ -1.06
RIF1-211ENST00000494333 SF1Q15637 639 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 CRY1Q16526 586 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 USP39Q53GS9 565 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 PM20D1Q6GTS8 502 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 ANO7Q6IWH7 933 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 RSRC2Q7L4I2 434 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 UBR7Q8N806 425 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 TFAP2BQ92481 460 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 IPO9Q96P70 1041 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 XPO6Q96QU8 1125 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 TPSD1Q9BZJ3 242 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 ULBP1Q9BZM6 244 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 ARRDC1-AS1Q9H2J1 176 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 ZDHHC4Q9NPG8 344 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 SEMA4GQ9NTN9 838 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 DNAJC17Q9NVM6 304 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 PLK2Q9NYY3 685 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 MARCH2Q9P0N8 246 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 WDR35Q9P2L0 1181 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 RWDD2AQ9UIY3 292 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 MMP17Q9ULZ9 603 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 INVSQ9Y283 1065 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
RIF1-211ENST00000494333 ZNF638Q14966 1978 aaKnown RBP8.44□□□□□ -1.06
RIF1-211ENST00000494333 KIF26AQ9ULI4 1882 aaPredicted RBP8.43□□□□□ -1.06
RIF1-211ENST00000494333 FANCMQ8IYD8 2048 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 SLC12A8A0AV02 714 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 PRR5-ARHGAP8B1AHC4 643 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 DCLK1O15075 740 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 PSPNO60542 156 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 LRP3O75074 770 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ALDH1A2O94788 518 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 CALCAP01258 141 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 AFPP02771 609 aaKnown RBP8.43□□□□□ -1.06
RIF1-211ENST00000494333 SETSIPP0DME0 302 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 LCP1P13796 627 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 HNRNPLP14866 589 aaKnown RBP eCLIP8.43□□□□□ -1.06
RIF1-211ENST00000494333 JUNBP17275 347 aaPredicted RBP8.43□□□□□ -1.06
RIF1-211ENST00000494333 SDHBP21912 280 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 CHKAP35790 457 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ARHGAP8P85298 464 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 GCNT1Q02742 428 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ADIGQ0VDE8 80 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 CNGA2Q16280 664 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 CSRP2Q16527 193 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 HSF5Q4G112 596 aaPredicted RBP8.43□□□□□ -1.06
RIF1-211ENST00000494333 EOGTQ5NDL2 527 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 C10orf76Q5T2E6 689 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 BSPRYQ5W0U4 402 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 GRAMD4Q6IC98 578 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 PMF1Q6P1K2 205 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 LCLAT1Q6UWP7 414 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 CYP2R1Q6VVX0 501 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 DGLUCYQ7Z3D6 616 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 DENND1CQ8IV53 801 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ARHGEF19Q8IW93 802 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 LILRA2Q8N149 483 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 SIX6OS1Q8N1H7 587 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 TERB1Q8NA31 727 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 MDGA1Q8NFP4 955 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ABHD4Q8TB40 342 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 RNF139Q8WU17 664 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 SLC35F5Q8WV83 523 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 KCTD13Q8WZ19 329 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 LOXL4Q96JB6 756 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ZC3H10Q96K80 434 aaKnown RBP8.43□□□□□ -1.06
RIF1-211ENST00000494333 ZSWIM1Q9BR11 485 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 DCLK3Q9C098 648 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 UBE2TQ9NPD8 197 aaPredicted RBP8.43□□□□□ -1.06
RIF1-211ENST00000494333 ABCC13Q9NSE7 274 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 DLL3Q9NYJ7 618 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 ZNF510Q9Y2H8 683 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
RIF1-211ENST00000494333 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 YJEFN3A6XGL0 299 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 PRRT4C9JH25 899 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 E7ENQ6 273 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 NRDCO43847 1150 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 CACNG3O60359 315 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 RHOBTB1O94844 696 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 CISD3P0C7P0 127 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 CORO1AP31146 461 aaKnown RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 HOXC12P31275 282 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 WASP42768 502 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 RGS7P49802 495 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 ATXN1P54253 815 aaKnown RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 STILQ15468 1287 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 ELF2Q15723 593 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 CCDC6Q16204 474 aa8.42□□□□□ -1.06
RIF1-211ENST00000494333 TPD52L1Q16890 204 aaPredicted RBP8.42□□□□□ -1.06
RIF1-211ENST00000494333 PLK5Q496M5 336 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms