RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF670Q9BS34 389 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 DDR1Q08345 913 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 DDR2Q16832 855 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 FBXL19Q6PCT2 694 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 PALB2Q86YC2 1186 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 ATL1Q8WXF7 558 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 SLC4A9Q96Q91 983 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 OR12D3Q9UGF7 316 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 ADM5C9JUS6 153 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 BTN3A1O00481 513 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 ZNF862O60290 1169 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 ANXA6P08133 673 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 NFICP08651 508 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 IL2P60568 153 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 ECM1Q16610 540 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 DHRSXQ8N5I4 330 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 APOL4Q9BPW4 351 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 TBC1D10AQ9BXI6 508 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 CATSPERZQ9NTU4 200 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 NR2E3Q9Y5X4 410 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 QSOX1O00391 747 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 CD3EAPO15446 510 aaKnown RBP19.39■□□□□ 0.7
COL27A1-207ENST00000494090 LTA4HP09960 611 aaKnown RBP19.39■□□□□ 0.7
COL27A1-207ENST00000494090 ITGB6P18564 788 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 CXCR2P25025 360 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 NEK3P51956 506 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 RAB14P61106 215 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 NKAPQ8N5F7 415 aaKnown RBP19.39■□□□□ 0.7
COL27A1-207ENST00000494090 MAGEB10Q96LZ2 347 aaPredicted RBP19.39■□□□□ 0.7
COL27A1-207ENST00000494090 MFSD14AQ96MC6 490 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 GAD1Q99259 594 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 DUSP12Q9UNI6 340 aa19.39■□□□□ 0.7
COL27A1-207ENST00000494090 WNT7AO00755 349 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 PEX1O43933 1283 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 FAM20BO75063 409 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 MAGEA10P43363 369 aaPredicted RBP19.39■□□□□ 0.69
COL27A1-207ENST00000494090 PYDC1Q8WXC3 89 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 LIMD1Q9UGP4 676 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ENTPD4Q9Y227 616 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 TRIM17Q9Y577 477 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 SF3B1O75533 1304 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ALOX15BO15296 676 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 BIRC5O15392 142 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 CRY1Q16526 586 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 GPSM1Q86YR5 675 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 VMP1Q96GC9 406 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 TDRKHQ9Y2W6 561 aaKnown RBP19.39■□□□□ 0.69
COL27A1-207ENST00000494090 BAZ2BQ9UIF8 2168 aaKnown RBP19.39■□□□□ 0.69
COL27A1-207ENST00000494090 MYPNQ86TC9 1320 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 TRAV19A0A0A6YYK7 116 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 TRIM24O15164 1050 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 GNRH1P01148 92 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ERBB2P04626 1255 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 PSMB9P28065 219 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 SNRPD1P62314 119 aaKnown RBP19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ACSM2AQ08AH3 577 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ARSHQ5FYA8 562 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 HECTD3Q5T447 861 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ACSM2BQ68CK6 577 aa19.39■□□□□ 0.69
COL27A1-207ENST00000494090 ZSCAN18Q8TBC5 510 aaPredicted RBP19.39■□□□□ 0.69
COL27A1-207ENST00000494090 RNF225M0QZC1 329 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 FAM228AQ86W67 206 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 BHLHE22Q8NFJ8 381 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 HGH1Q9BTY7 390 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 A0A087WXM4 84 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 ATG7O95352 703 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 UQCRBP14927 111 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 NOS3P29474 1203 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 PLK1P53350 603 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 UNC5AQ6ZN44 842 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 RD3Q7Z3Z2 195 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 STK32CQ86UX6 486 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 RNF208Q9H0X6 261 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 DNMT3LQ9UJW3 386 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 CYP7B1O75881 506 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 SNUPNO95149 360 aaKnown RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 NPR3P17342 541 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 LRPAP1P30533 357 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 S100A3P33764 101 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 CAPSQ13938 189 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 ANKRD49Q8WVL7 239 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 AHCYL2Q96HN2 611 aaKnown RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 ZNF112Q9UJU3 913 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 CCDC189A1A4V9 331 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 FMO4P31512 558 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 PKNOX1P55347 436 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 BST1Q10588 318 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 RNFT2Q96EX2 444 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 EBNA1BP2Q99848 306 aaKnown RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.38■□□□□ 0.696e-7■■■□□ 15.7
COL27A1-207ENST00000494090 LRMDAQ9H2I8 198 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 PSME2Q9UL46 239 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 RPL26L1Q9UNX3 145 aaKnown RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 MYOM1P52179 1685 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 ATP4AP20648 1035 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 MRPS22P82650 360 aaKnown RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 MRPS6P82932 125 aaKnown RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 COL9A3Q14050 684 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-207ENST00000494090 CES5AQ6NT32 575 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms