RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RESTQ13127 1097 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 FRG1Q14331 258 aaKnown RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 SEMA3AQ14563 771 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 RRP1BQ14684 758 aaKnown RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 BEAN1Q3B7T3 259 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 GLE1Q53GS7 698 aaKnown RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 GKAP1Q5VSY0 366 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 FAM171A1Q5VUB5 890 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 PLBD1Q6P4A8 553 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 VWA1Q6PCB0 445 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 Q6ZWC4 215 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 USP51Q70EK9 711 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 CHST3Q7LGC8 479 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 WDR53Q7Z5U6 358 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 DNAJB7Q7Z6W7 309 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 NEK8Q86SG6 692 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 TMEM200AQ86VY9 491 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 LNX2Q8N448 690 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 AMER2Q8N7J2 671 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 MYCBPAPQ8TBZ2 947 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 C2CD4CQ8TF44 421 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 LPIN2Q92539 896 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 SGCDQ92629 289 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 RMDN1Q96DB5 314 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 SAT2Q96F10 170 aaPredicted RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 EDC3Q96F86 508 aaKnown RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 LOXL4Q96JB6 756 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 CADM1Q9BY67 442 aaKnown RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 SLC32A1Q9H598 525 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 LTB4R2Q9NPC1 389 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 GAR1Q9NY12 217 aaKnown RBP4.68□□□□□ -1.66
GTF3A-208ENST00000493903 DLGAP2Q9P1A6 1054 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 SEMA5BQ9P283 1151 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 MTRRQ9UBK8 725 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 HAO1Q9UJM8 370 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 BTBD3Q9Y2F9 522 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 CLDN16Q9Y5I7 305 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 DUSP10Q9Y6W6 482 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 PDS5BQ9NTI5 1447 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 ADGRA2Q96PE1 1338 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 MRC2Q9UBG0 1479 aa4.68□□□□□ -1.66
GTF3A-208ENST00000493903 LOC100509620A0A075B734 347 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 hCG_1809904A0A1W2PP81 198 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 A0A1W2PPE2 198 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 A0A1W2PR64 198 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ARHGAP10A1A4S6 786 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 OR6C68A6NDL8 312 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 NPEPPSL1A6NEC2 478 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 AP4M1O00189 453 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PSMA7O14818 248 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 SUV39H1O43463 412 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 FOXS1O43638 330 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 STRNO43815 780 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PRICKLE3O43900 615 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 GGPS1O95749 300 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 HLA-DQA2P01906 255 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ALDOCP09972 364 aaKnown RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 CCDC175P0C221 793 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 MYBL1P10243 752 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 COMTP21964 271 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 DDX6P26196 483 aaKnown RBP eCLIP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 POU1F1P28069 291 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 STAT6P42226 847 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 LIG4P49917 911 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 MMP14P50281 582 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PDE1AP54750 535 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 OLIG2Q13516 323 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PTPRRQ15256 657 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ADIPOQQ15848 244 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 CNGA3Q16281 694 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ODF2Q5BJF6 829 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 SERTAD4-AS1Q5TG53 156 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 TXNDC8Q6A555 127 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 IL20RBQ6UXL0 311 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 GLDNQ6ZMI3 551 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PRSS45Q7RTY3 260 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 LINC00346Q8IVM7 164 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 CEP97Q8IW35 865 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 CEP57L1Q8IYX8 460 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 MAFAQ8NHW3 353 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PIGOQ8TEQ8 1089 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PSPC1Q8WXF1 523 aaKnown RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 GTF3C6Q969F1 213 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 VPS33AQ96AX1 596 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 PBKQ96KB5 322 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 RAB3IPQ96QF0 476 aaPredicted RBP4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ABHD1Q96SE0 405 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 DESI2Q9BSY9 194 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 TUBB6Q9BUF5 446 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 HEMGNQ9BXL5 484 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 KLHL4Q9C0H6 718 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ENTPD7Q9NQZ7 604 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 ASAH2Q9NR71 780 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 BABAM1Q9NWV8 329 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 SELENONQ9NZV5 590 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 UPB1Q9UBR1 384 aa4.67□□□□□ -1.66
GTF3A-208ENST00000493903 SEC63Q9UGP8 760 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms