RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SMAD6O43541 496 aaKnown RBP19.72■□□□□ 0.75
USP39-218ENST00000493829 STIP1P31948 543 aaKnown RBP19.72■□□□□ 0.75
USP39-218ENST00000493829 SERPINH1P50454 418 aaKnown RBP19.72■□□□□ 0.75
USP39-218ENST00000493829 SEC13P55735 322 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ITKQ08881 620 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ANKRD20A2Q5SQ80 823 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ANKRD20A1Q5TYW2 823 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ANKRD20A3Q5VUR7 823 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ARHGEF18Q6ZSZ5 1173 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 PID1Q7Z2X4 250 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 SPATA13Q96N96 652 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 PCDH9Q9HC56 1237 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 ERVW-1Q9UQF0 538 aa19.72■□□□□ 0.75
USP39-218ENST00000493829 MUSKO15146 869 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 GJB3O75712 270 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 CD72P21854 359 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 RPL22P35268 128 aaKnown RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 ACTN2P35609 894 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 GRIA2P42262 883 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 RENBPP51606 427 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 GPS1Q13098 491 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 PTK6Q13882 451 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 SYCP2LQ5T4T6 812 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 RALGPS2Q86X27 583 aaPredicted RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 PGBD5Q8N414 524 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 CNTD1Q8N815 330 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 TSEN2Q8NCE0 465 aaKnown RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 SLCO2A1Q92959 643 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 TTC17Q96AE7 1141 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 RTP4Q96DX8 246 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 ZNF599Q96NL3 588 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 IL12RB2Q99665 862 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 TM6SF2Q9BZW4 377 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 EPC1Q9H2F5 836 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 TNKS2Q9H2K2 1166 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 DPH5Q9H2P9 285 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 C8orf33Q9H7E9 229 aaPredicted RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 ELOVL2Q9NXB9 296 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 RSPH14Q9UHP6 348 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 FEZ2Q9UHY8 353 aaPredicted RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 MUC22E2RYF6 1773 aaPredicted RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 C5orf60A6NFR6 353 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 BNIP3LO60238 219 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 HEXIM1O94992 359 aaKnown RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 SRCP12931 536 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 NFKB1P19838 968 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 SULT2A1Q06520 285 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 HNRNPDQ14103 355 aaKnown RBP19.71■□□□□ 0.75
USP39-218ENST00000493829 CYTH1Q15438 398 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 P3H1Q32P28 736 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 ACCSLQ4AC99 568 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 SLC44A4Q53GD3 710 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 TEX44Q53QW1 395 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 ZNF366Q8N895 744 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 ERLEC1Q96DZ1 483 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 SEPT3Q9UH03 358 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 SLCO3A1Q9UIG8 710 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 NEU2Q9Y3R4 380 aa19.71■□□□□ 0.75
USP39-218ENST00000493829 ESYT3A0FGR9 886 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 FAM187AA6NFU0 413 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 EFCAB8A8MWE9 144 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 GCATO75600 419 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 EGFP01133 1207 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 ATP5BP06576 529 aaKnown RBP19.7■□□□□ 0.74
USP39-218ENST00000493829 DLDP09622 509 aaKnown RBP19.7■□□□□ 0.74
USP39-218ENST00000493829 PSMB4P28070 264 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 RGRP47804 291 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 GEMIN4P57678 1058 aaKnown RBP19.7■□□□□ 0.74
USP39-218ENST00000493829 RHOAP61586 193 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 PTPRNQ16849 979 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 FNDC3BQ53EP0 1204 aaKnown RBP19.7■□□□□ 0.74
USP39-218ENST00000493829 ATXN7L2Q5T6C5 722 aaPredicted RBP19.7■□□□□ 0.74
USP39-218ENST00000493829 EZH1Q92800 747 aaPredicted RBP19.7■□□□□ 0.74
USP39-218ENST00000493829 FATE1Q969F0 183 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 MRGPRX3Q96LB0 322 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 TEKT5Q96M29 485 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 CD320Q9NPF0 282 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 MUTYHQ9UIF7 546 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 FBXL21Q9UKT6 434 aa19.7■□□□□ 0.74
USP39-218ENST00000493829 OPHN1O60890 802 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 METTL18O95568 372 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 CD68P34810 354 aaPredicted RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 ADCY8P40145 1251 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 BASP1P80723 227 aaKnown RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 DSC2Q02487 901 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 GUCY2DQ02846 1103 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 RFTN1Q14699 578 aaPredicted RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 EIF4HQ15056 248 aaKnown RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 MLF2Q15773 248 aaPredicted RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 PREPLQ4J6C6 727 aaPredicted RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 EMC10Q5UCC4 262 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 EGFLAMQ63HQ2 1017 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 FSTL4Q6MZW2 842 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 CCDC70Q6NSX1 233 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 C22orf39Q6P5X5 142 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 BBS5Q8N3I7 341 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 SH2D3CQ8N5H7 860 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 TEX26Q8N6G2 289 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 OR6K2Q8NGY2 324 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms