RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DPEP3Q9H4B8 488 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 SLA2Q9H6Q3 261 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 AAASQ9NRG9 546 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 PSME2Q9UL46 239 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 EDARQ9UNE0 448 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 EIF3LQ9Y262 564 aaKnown RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 PCDHGA7Q9Y5G6 932 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 ALG6Q9Y672 507 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 TCRBV7S2A1N4TA0A589 114 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PIK3R2O00459 728 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PLD2O14939 933 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ZBTB5O15062 677 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TOM1L1O75674 476 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 KRT37O76014 449 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CYP2D6P10635 497 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PTPN1P18031 435 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 MARCKSL1P49006 195 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 NUDT2P50583 147 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 SRP54P61011 504 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ABCE1P61221 599 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ATP2C1P98194 919 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 SLC18A2Q05940 514 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 COASYQ13057 564 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 MMRN1Q13201 1228 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TYSND1Q2T9J0 566 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 Q3ZCU0 254 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ESCO2Q56NI9 601 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ATAD3CQ5T2N8 411 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ZFP1Q6P2D0 407 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 METTL23Q86XA0 190 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 DGKHQ86XP1 1220 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 STX12Q86Y82 276 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ADGRG5Q8IZF4 528 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ZFP90Q8TF47 636 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ELMO1Q92556 727 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TANKQ92844 425 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TESCQ96BS2 214 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CMTM5Q96DZ9 223 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 MARK4Q96L34 752 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 FAM118BQ9BPY3 351 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 LIN7BQ9HAP6 207 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 KCNK13Q9HB14 408 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CPNE5Q9HCH3 593 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 MAD2L2Q9UI95 211 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 KIAA1217Q5T5P2 1943 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 SH3D21A4FU49 640 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM77I1YAP6 450 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 LINC01387J3KSC0 135 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TOR1AO14656 332 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 NUPL2O15504 423 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CLDN3O15551 220 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 SYNCRIPO60506 623 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 SEC24AO95486 1093 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 UGT2B4P06133 528 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PROS1P07225 676 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ENO3P13929 434 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ALOX12P18054 663 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CYP7A1P22680 504 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PSMC2P35998 433 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 YAP1P46937 504 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 DAB2P98082 770 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CAV1Q03135 178 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM32Q13049 653 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ELOAQ14241 798 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 KCTD2Q14681 263 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 DUSP7Q16829 419 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 USP41Q3LFD5 358 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 C12orf60Q5U649 245 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF544Q6NX49 715 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ARCQ7LC44 396 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 KBTBD6Q86V97 674 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CHERPQ8IWX8 916 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ARL6IP6Q8N6S5 226 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CRYGNQ8WXF5 182 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 FBXW5Q969U6 566 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 INTS12Q96CB8 462 aaKnown RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PPP1R36Q96LQ0 422 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 DGCR6LQ9BY27 220 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PITHD1Q9GZP4 211 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 OLAHQ9NV23 265 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 FNIP2Q9P278 1114 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 CHORDC1Q9UHD1 332 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PGAP2Q9UHJ9 254 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PRR12Q9ULL5 1215 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 PCDHGC3Q9UN70 934 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF175Q9Y473 711 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 KCNE2Q9Y6J6 123 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 FRMPD4Q14CM0 1322 aa6.96□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF98A6NK75 572 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 SAC3D1A6NKF1 404 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 BTNL10A8MVZ5 291 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 ACOX3O15254 700 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 DDAH1O94760 285 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 RHOBTB1O94844 696 aa6.95□□□□□ -1.3
VPS13B-205ENST00000493587 EGFRP00533 1210 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms