RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KIAA1211LQ6NV74 962 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 TMCO3Q6UWJ1 677 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 RASSF3Q86WH2 238 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 CACUL1Q86Y37 369 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 PGBD3Q8N328 593 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 HMGB4Q8WW32 186 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 TSC1Q92574 1164 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 ARHGEF2Q92974 986 aaKnown RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 HMCESQ96FZ2 354 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 CELF6Q96J87 481 aaKnown RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 ZNF670Q9BS34 389 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 MAGEH1Q9H213 219 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 NOL6Q9H6R4 1146 aaKnown RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 RCOR3Q9P2K3 495 aaPredicted RBP11.84□□□□□ -0.51
CTSA-209ENST00000493522 HPCAL4Q9UM19 191 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 MFHAS1Q9Y4C4 1052 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 ALG6Q9Y672 507 aa11.84□□□□□ -0.51
CTSA-209ENST00000493522 TP53BP1Q12888 1972 aaPredicted RBP11.83□□□□□ -0.52
CTSA-209ENST00000493522 A0A1W2PQF6 199 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 GRID2IPA4D2P6 1211 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 DFFAO00273 331 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 GIPC1O14908 333 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 KRT86O43790 486 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 C1QTNF9P0C862 333 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 CEACAM1P13688 526 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 CSRP1P21291 193 aaKnown RBP11.83□□□□□ -0.52
CTSA-209ENST00000493522 SERPINB6P35237 376 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 MARCKSL1P49006 195 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 DHPSP49366 369 aaPredicted RBP11.83□□□□□ -0.52
CTSA-209ENST00000493522 ARSEP51690 589 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 YBEYP58557 167 aaPredicted RBP11.83□□□□□ -0.52
CTSA-209ENST00000493522 ARF5P84085 180 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 PARP15Q460N3 678 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 ACCSLQ4AC99 568 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 LRRC38Q5VT99 294 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 RETSATQ6NUM9 610 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 KIAA1324Q6UXG2 1013 aaKnown RBP11.83□□□□□ -0.52
CTSA-209ENST00000493522 UMODL1-AS1Q8N2C9 162 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 NPWQ8N729 165 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 NETO2Q8NC67 525 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 MDGA1Q8NFP4 955 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 RAPGEF5Q92565 580 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 MYO19Q96H55 970 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 SPACA7Q96KW9 195 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 TMEM245Q9H330 911 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 MTG2Q9H4K7 406 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 DDX56Q9NY93 547 aaKnown RBP11.83□□□□□ -0.52
CTSA-209ENST00000493522 SLCO3A1Q9UIG8 710 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 GUCA1BQ9UMX6 200 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 INVSQ9Y283 1065 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTSA-209ENST00000493522 LAMA5O15230 3695 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 FREM2Q5SZK8 3169 aa11.83□□□□□ -0.52
CTSA-209ENST00000493522 ATRXP46100 2492 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 EDDM13A0A1B0GTR0 161 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 TMEM8BA6NDV4 472 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 ARHGAP42A6NI28 874 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 MFSD11O43934 449 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 BNIP3LO60238 219 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SIN3BO75182 1162 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 PALMO75781 387 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SRCP12931 536 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 GABRG2P18507 467 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 KDELR1P24390 212 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SERPINH1P50454 418 aaKnown RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 NDST2P52849 883 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 GEMIN4P57678 1058 aaKnown RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 CCDC173Q0VFZ6 552 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 HNRNPA1L2Q32P51 320 aaKnown RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 ANKRD20A8PQ5CZ79 823 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 C22orf39Q6P5X5 142 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 PEX26Q7Z412 305 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 CCDC50Q8IVM0 306 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SYCE1Q8N0S2 351 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 KDM1BQ8NB78 822 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 PIGKQ92643 395 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 ZNF830Q96NB3 372 aaPredicted RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 ACE2Q9BYF1 805 aaPredicted RBP11.82□□□□□ -0.52
CTSA-209ENST00000493522 SLC39A8Q9C0K1 460 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SLC6A17Q9H1V8 727 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 KCNF1Q9H3M0 494 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 LRRC19Q9H756 370 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SP110Q9HB58 689 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 LZTFL1Q9NQ48 299 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 ETNK2Q9NVF9 386 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 SUN2Q9UH99 717 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 ZMIZ1Q9ULJ6 1067 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 HS3ST2Q9Y278 367 aa11.82□□□□□ -0.52
CTSA-209ENST00000493522 PPP2R2CQ9Y2T4 447 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms