RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	CCNC	P24863	283 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	RBL1	P28749	1068 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	CORO1A	P31146	461 aa	Known RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	ETFB	P38117	255 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	YBEY	P58557	167 aa	Predicted RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	SARNP	P82979	210 aa	Known RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	SATB1	Q01826	763 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	PPID	Q08752	370 aa	Known RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	PRKD1	Q15139	912 aa	Predicted RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	TRIP13	Q15645	432 aa	Predicted RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	GAB4	Q2WGN9	574 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	ANO4	Q32M45	955 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	C5orf22	Q49AR2	442 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	SPDYC	Q5MJ68	293 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	RAP1GAP2	Q684P5	730 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	ITPRIPL1	Q6GPH6	555 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	FBXL22	Q6P050	247 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	TSSK4	Q6SA08	328 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502		Q6ZS52	159 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	DENND1C	Q8IV53	801 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	PPIL6	Q8IXY8	311 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	ATPAF2	Q8N5M1	289 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	NSMCE1	Q8WV22	266 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	HINFP	Q9BQA5	517 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	VIPAS39	Q9H9C1	493 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	SLC8A2	Q9UPR5	921 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	SHOC2	Q9UQ13	582 aa		13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.78	□□□□□ -0.2
NUP188-208	ENST00000491502	GOLGA6C	A6NDK9	693 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	GOLGA6B	A6NDN3	693 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	SCAMP3	O14828	347 aa	Known RBP	13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	LILRB5	O75023	590 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	RNF40	O75150	1001 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CLDN11	O75508	207 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	NEBL	O76041	1014 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	GOLGA6D	P0CG33	693 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	TDGF1	P13385	188 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CNR2	P34972	360 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CHKA	P35790	457 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	FDFT1	P37268	417 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	GARS	P41250	739 aa	Known RBP	13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	GRIA2	P42262	883 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	TNFRSF4	P43489	277 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	VPS41	P49754	854 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	ITGA8	P53708	1063 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CDH4	P55283	916 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	SLC10A2	Q12908	348 aa	Predicted RBP	13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	PARP15	Q460N3	678 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	C6orf118	Q5T5N4	469 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CFAP58	Q5T655	872 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CHST9	Q7L1S5	443 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	TMEM25	Q86YD3	366 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	FANCM	Q8IYD8	2048 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	CCDC13	Q8IYE1	715 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	LGI2	Q8N0V4	545 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	UMODL1-AS1	Q8N2C9	162 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	MREG	Q8N565	214 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	WBP2	Q969T9	261 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	ACD	Q96AP0	544 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	TSGA13	Q96PP4	275 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	XPO6	Q96QU8	1125 aa	Known RBP	13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	PRMT1	Q99873	361 aa	Known RBP	13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	PHACTR1	Q9C0D0	580 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	USP29	Q9HBJ7	922 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	GOLGA6A	Q9NYA3	693 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	GRHL1	Q9NZI5	618 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	DEC1	Q9P2X7	70 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	STOML2	Q9UJZ1	356 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	SNX10	Q9Y5X0	201 aa		13.77	□□□□□ -0.21
NUP188-208	ENST00000491502	MYOF	Q9NZM1	2061 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502		E7EVH7	732 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502		K7ESF4	209 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	DFFA	O00273	331 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	RAMP2	O60895	175 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	KAT7	O95251	611 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	RPL22	P35268	128 aa	Known RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	SLC6A11	P48066	632 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	OXCT1	P55809	520 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	MRPS21	P82921	87 aa	Known RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	ZNF177	Q13360	481 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	HSF5	Q4G112	596 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	TMCO4	Q5TGY1	634 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	ALS2CL	Q60I27	953 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	NAIF1	Q69YI7	327 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502		Q6ZNB5	142 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	ASCL5	Q7RTU5	278 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	C14orf80	Q86SX3	495 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	NLRP14	Q86W24	1093 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	LONP2	Q86WA8	852 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	ZNF683	Q8IZ20	524 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	CAMKK1	Q8N5S9	505 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	HJURP	Q8NCD3	748 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	FBXO25	Q8TCJ0	367 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	KCNV2	Q8TDN2	545 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	FATE1	Q969F0	183 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	SPATA13	Q96N96	652 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	RUFY1	Q96T51	708 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	ZDHHC18	Q9NUE0	388 aa		13.76	□□□□□ -0.21
NUP188-208	ENST00000491502	MARK1	Q9P0L2	795 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms