RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 EPS8L1Q8TE68 723 aa20.15■□□□□ 0.82
SREBF1-216ENST00000490796 HNRNPLLQ8WVV9 542 aaKnown RBP20.15■□□□□ 0.82
SREBF1-216ENST00000490796 ARRDC3Q96B67 414 aa20.15■□□□□ 0.82
SREBF1-216ENST00000490796 VPS16Q9H269 839 aa20.15■□□□□ 0.82
SREBF1-216ENST00000490796 METTL5Q9NRN9 209 aaKnown RBP20.15■□□□□ 0.82
SREBF1-216ENST00000490796 CA5BQ9Y2D0 317 aa20.15■□□□□ 0.82
SREBF1-216ENST00000490796 SDC3O75056 442 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 GFPT2O94808 682 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 ACADVLP49748 655 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 TAS2R38P59533 333 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 CDO1Q16878 200 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 COL28A1Q2UY09 1125 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 ARCQ7LC44 396 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 CEP44Q9C0F1 390 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 TMEM59LQ9UK28 342 aa20.14■□□□□ 0.81
SREBF1-216ENST00000490796 COL5A1P20908 1838 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 LEFTY1O75610 366 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 CKMT2P17540 419 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 HNRNPA2B1P22626 353 aaKnown RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 GLDCP23378 1020 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 SDC4P31431 198 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 ETFBP38117 255 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 SERPINH1P50454 418 aaKnown RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 NEK3P51956 506 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 POLR2FP61218 127 aaKnown RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 CDR2Q01850 454 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 GNA12Q03113 381 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 ILKQ13418 452 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 CAMK2BQ13554 666 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 SFMBT2Q5VUG0 894 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 RWDD4Q6NW29 188 aaKnown RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 FBXL19Q6PCT2 694 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 DPY19L3Q6ZPD9 716 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 RYBPQ8N488 228 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 PCDH20Q8N6Y1 951 aaKnown RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 EMC1Q8N766 993 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 NXPE2Q96DL1 559 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 PCMTD1Q96MG8 357 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 HEPHQ9BQS7 1158 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 CALN1Q9BXU9 219 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 HDAC8Q9BY41 377 aa20.13■□□□□ 0.81
SREBF1-216ENST00000490796 FAM207AQ9NSI2 230 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-216ENST00000490796 DAB2P98082 770 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 MAPK8IP2Q13387 824 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-216ENST00000490796 SYCP1Q15431 976 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 ZNF284Q2VY69 593 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 CARD16Q5EG05 197 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 HES3Q5TGS1 186 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 TRIM72Q6ZMU5 477 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 PHLDB2Q86SQ0 1253 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 TMEM145Q8NBT3 493 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 ANKRD20A12PQ8NF67 263 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 ENOX1Q8TC92 643 aaKnown RBP20.12■□□□□ 0.81
SREBF1-216ENST00000490796 SLC20A1Q8WUM9 679 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 RXFP2Q8WXD0 754 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 C11orf70Q9BRQ4 267 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 FZD3Q9NPG1 666 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 NLRC4Q9NPP4 1024 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 KLHL11Q9NVR0 708 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 PPARGC1AQ9UBK2 798 aaKnown RBP20.12■□□□□ 0.81
SREBF1-216ENST00000490796 HPCAL4Q9UM19 191 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 AK5Q9Y6K8 562 aa20.12■□□□□ 0.81
SREBF1-216ENST00000490796 DOCK9Q9BZ29 2069 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 SOX5P35711 763 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 STAT1P42224 750 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 GEMIN4P57678 1058 aaKnown RBP20.11■□□□□ 0.81
SREBF1-216ENST00000490796 TRNP1Q6NT89 227 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 PDZD3Q86UT5 571 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 FAM174AQ8TBP5 190 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 TSC1Q92574 1164 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 FEM1CQ96JP0 617 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 ZDHHC6Q9H6R6 413 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 OR12D3Q9UGF7 316 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 NOCTQ9UK39 431 aaKnown RBP20.11■□□□□ 0.81
SREBF1-216ENST00000490796 FCF1Q9Y324 198 aaKnown RBP20.11■□□□□ 0.81
SREBF1-216ENST00000490796 DAAM1Q9Y4D1 1078 aa20.11■□□□□ 0.81
SREBF1-216ENST00000490796 ARID1BQ8NFD5 2236 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 ADAMTS20P59510 1910 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 CYP1A1P04798 512 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 ALPPL2P10696 532 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 MMP8P22894 467 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 ITGB7P26010 798 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 L1CAMP32004 1257 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 ADRA1BP35368 520 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 NSFP46459 744 aaKnown RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 CCNHP51946 323 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 CLDN6P56747 220 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 RPS21P63220 83 aaKnown RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 TARDBPQ13148 414 aaKnown RBP eCLIP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 POLD3Q15054 466 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 KRT31Q15323 416 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 C15orf59Q2T9L4 293 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 SEL1L3Q68CR1 1132 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 KIAA1161Q6NSJ0 714 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 BNIPLQ7Z465 357 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 PTAR1Q7Z6K3 402 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 ZNF354CQ86Y25 554 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 OR13H1Q8NG92 308 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 SLC30A5Q8TAD4 765 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 DCBLD2Q96PD2 775 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms