RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 CDH12P55289 794 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 ICA1Q05084 483 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 FOXO1Q12778 655 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 C9orf50Q5SZB4 431 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 C9orf57Q5W0N0 161 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 C16orf82Q7Z2V1 217 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 SERPINA11Q86U17 422 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 CUZD1Q86UP6 607 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 TRIM74Q86UV6 250 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 TRIM73Q86UV7 250 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 WDR5BQ86VZ2 330 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 FAM216AQ8WUB2 273 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 TEFMQ96QE5 360 aaKnown RBP4.07□□□□□ -1.76
HMGN1-218ENST00000490032 IFT27Q9BW83 186 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 DACT1Q9NYF0 836 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 UPB1Q9UBR1 384 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 CDH22Q9UJ99 828 aa4.07□□□□□ -1.76
HMGN1-218ENST00000490032 SRPRBQ9Y5M8 271 aaKnown RBP4.07□□□□□ -1.76
HMGN1-218ENST00000490032 C17orf100A8MU93 164 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 PLIN1O60240 522 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 CLDN7O95471 211 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 CYP4B1P13584 511 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 ACP5P13686 325 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 ARSAP15289 507 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 TRAF3Q13114 568 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 IZUMO4Q1ZYL8 232 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 ZNF628Q5EBL2 1059 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 TMEM268Q5VZI3 342 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 TBC1D9BQ66K14 1250 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 SULT6B1Q6IMI4 303 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 ARMC9Q7Z3E5 817 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 NEXN-AS1Q8NBZ9 246 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 OR14A16Q8NHC5 309 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 TRAPPC9Q96Q05 1148 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 PPP1R10Q96QC0 940 aaKnown RBP4.06□□□□□ -1.76
HMGN1-218ENST00000490032 CRB3Q9BUF7 120 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 CLPBQ9H078 707 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 LRFN1Q9P244 771 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 KCND3Q9UK17 655 aa4.06□□□□□ -1.76
HMGN1-218ENST00000490032 SMTNL1A8MU46 457 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 H0Y3Z8 333 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 SYN3O14994 580 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 CSTBP04080 98 aaKnown RBP4.05□□□□□ -1.76
HMGN1-218ENST00000490032 MMP3P08254 477 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 NAGAP17050 411 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 SMAD1Q15797 465 aaKnown RBP4.05□□□□□ -1.76
HMGN1-218ENST00000490032 LRRC24Q50LG9 513 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.05□□□□□ -1.768e-20■■■□□ 18.9
HMGN1-218ENST00000490032 CREB3L2Q70SY1 520 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 RASGRP2Q7LDG7 609 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 BRSK2Q8IWQ3 736 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 CACNA2D3Q8IZS8 1091 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 RBFAQ8N0V3 343 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 SCAIQ8N9R8 606 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 FSIP1Q8NA03 581 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 DNASE2BQ8WZ79 361 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 GFM1Q96RP9 751 aaKnown RBP4.05□□□□□ -1.76
HMGN1-218ENST00000490032 G6PC2Q9NQR9 355 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 TXLNGQ9NUQ3 528 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 THAP1Q9NVV9 213 aa4.05□□□□□ -1.76
HMGN1-218ENST00000490032 IGHV4-28A0A0C4DH34 117 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 SRRM3A6NNA2 597 aaPredicted RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 KIF1CO43896 1103 aaKnown RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 ZBTB11O95625 1053 aaPredicted RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 TFRCP02786 760 aaKnown RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 ITGB8P26012 769 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 PNPLA4P41247 253 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 MCM2P49736 904 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 COMPP49747 757 aaPredicted RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 MVDP53602 400 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 ERVFC1-1P60608 527 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 THOC5Q13769 683 aaKnown RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 PLCB4Q15147 1175 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 SYCP2LQ5T4T6 812 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 ATG9BQ674R7 924 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 SPSB3Q6PJ21 355 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 MON1BQ7L1V2 547 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 RRAGAQ7L523 313 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 NR2C2APQ86WQ0 139 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 PALB2Q86YC2 1186 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 TMC8Q8IU68 726 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 RTP4Q96DX8 246 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 SLITRK1Q96PX8 696 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 IL25Q9H293 177 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 DDX31Q9H8H2 851 aaKnown RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 PLSCR4Q9NRQ2 329 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 GRHL1Q9NZI5 618 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 FBXO40Q9UH90 709 aa4.04□□□□□ -1.76
HMGN1-218ENST00000490032 AGO1Q9UL18 857 aaKnown RBP4.04□□□□□ -1.76
HMGN1-218ENST00000490032 DDTLA6NHG4 134 aaPredicted RBP4.03□□□□□ -1.76
HMGN1-218ENST00000490032 EYA2O00167 538 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 SLC16A5O15375 505 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 METTL18O95568 372 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 CST5P28325 142 aaPredicted RBP4.03□□□□□ -1.76
HMGN1-218ENST00000490032 RFC1P35251 1148 aaPredicted RBP4.03□□□□□ -1.76
HMGN1-218ENST00000490032 DPP6P42658 865 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 BNC1Q01954 994 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 COASYQ13057 564 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 PDCLQ13371 301 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms