RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SLCO1A2P46721 670 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 KPNA2P52292 529 aaKnown RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 EPHB3P54753 998 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 GYS2P54840 703 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SMAD3P84022 425 aaKnown RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 FPGSQ05932 587 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 MGAT5Q09328 741 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 RAB33AQ14088 237 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 RFTN1Q14699 578 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TMED2Q15363 201 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 INSCQ1MX18 579 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 RALGPS1Q5JS13 557 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 C10orf120Q5SQS8 335 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 HECTD3Q5T447 861 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 MANEALQ5VSG8 457 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 HHATQ5VTY9 493 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 OTUD1Q5VV17 481 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 FYB2Q5VWT5 728 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 PDPK2PQ6A1A2 396 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 CASC4Q6P4E1 433 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TIFABQ6ZNK6 161 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 GPRIN1Q7Z2K8 1008 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TMCO2Q7Z6W1 182 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SETD3Q86TU7 594 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 HERC6Q8IVU3 1022 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 KLHDC8BQ8IXV7 354 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SRRM1Q8IYB3 904 aaKnown RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TCEAL8Q8IYN2 117 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 RNF168Q8IYW5 571 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 DNAAF3Q8N9W5 541 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 GLIS1Q8NBF1 620 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 LEMD2Q8NC56 503 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 CCDC197Q8NCU1 140 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SCAMP5Q8TAC9 235 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 CCDC110Q8TBZ0 833 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 ZNF512Q96ME7 567 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 FCRL5Q96RD9 977 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SRPK1Q96SB4 655 aaKnown RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SEPT5Q99719 369 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 CPNE1Q99829 537 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 LPIN3Q9BQK8 851 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SIK2Q9H0K1 926 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 MAGEH1Q9H213 219 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 MRM3Q9HC36 420 aaKnown RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 MRPL17Q9NRX2 175 aaKnown RBP6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TMLHEQ9NVH6 421 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 EURLQ9NYK6 297 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 SEPT10Q9P0V9 454 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 DNAJB4Q9UDY4 337 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 MAD1L1Q9Y6D9 718 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TRIP11Q15643 1979 aa6.49□□□□□ -1.37
SF3A3-208ENST00000489537 TDRD15B5MCY1 1934 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PTPRSQ13332 1948 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TRANK1O15050 2925 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TCRBV9S1A1TA0A576 114 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 FAM159BA6NKW6 160 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 DRGXA6NNA5 263 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SLC38A8A6NNN8 435 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 GOLGA8MH3BSY2 632 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 RFXAPO00287 272 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PFDN6O15212 129 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CACNG3O60359 315 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 RAMP2O60895 175 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 EFEMP2O95967 443 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 IGLV3-27P01718 113 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ITGB1P05556 798 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 APOA4P06727 396 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 GSTA1P08263 222 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ALADP13716 330 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TFE3P19532 575 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SPRP35270 261 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PBX3P40426 434 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ATXN1P54253 815 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PRKAA2P54646 552 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CSE1LP55060 971 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CDH4P55283 916 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SLC18A2Q05940 514 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 IL10RBQ08334 325 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 WASHC5Q12768 1159 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ASPHQ12797 758 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 POU4F2Q12837 409 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SLC10A2Q12908 348 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 TAF10Q12962 218 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SKIDA1Q1XH10 827 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 C5orf22Q49AR2 442 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 PCID2Q5JVF3 399 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 FNBP1LQ5T0N5 605 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 GRTP1Q5TC63 336 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 MARC1Q5VT66 337 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 AFMIDQ63HM1 303 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 ATG16L1Q676U5 607 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 KYAT3Q6YP21 454 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 KIAA0408Q6ZU52 694 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 MARK2Q7KZI7 788 aaKnown RBP6.48□□□□□ -1.37
SF3A3-208ENST00000489537 CHST9Q7L1S5 443 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 OTOP2Q7RTS6 562 aa6.48□□□□□ -1.37
SF3A3-208ENST00000489537 SCD5Q86SK9 330 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms