RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SGF29Q96ES7 293 aa16.57■□□□□ 0.24
USP48-210ENST00000489108 RPRD1AQ96P16 312 aaPredicted RBP16.57■□□□□ 0.24
USP48-210ENST00000489108 IL12RB2Q99665 862 aa16.57■□□□□ 0.24
USP48-210ENST00000489108 SLC17A9Q9BYT1 436 aa16.57■□□□□ 0.24
USP48-210ENST00000489108 DYRK4Q9NR20 520 aa16.57■□□□□ 0.24
USP48-210ENST00000489108 IPO11Q9UI26 975 aaKnown RBP16.57■□□□□ 0.24
USP48-210ENST00000489108 K7ERQ8 282 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 TPP1O14773 563 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 SART1O43290 800 aaKnown RBP16.56■□□□□ 0.24
USP48-210ENST00000489108 FAM87AP0C7U9 286 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 CMA1P23946 247 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 GPD2P43304 727 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 ARSIQ5FYB1 569 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 TPRG1LQ5T0D9 272 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 KYAT3Q6YP21 454 aaKnown RBP16.56■□□□□ 0.24
USP48-210ENST00000489108 PARGQ86W56 976 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 ATP11CQ8NB49 1132 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 CHST14Q8NCH0 376 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 KAT5Q92993 513 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 HPSEQ9Y251 543 aa16.56■□□□□ 0.24
USP48-210ENST00000489108 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 SPINT1O43278 529 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 SMAD6O43541 496 aaKnown RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 SNAP91O60641 907 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 F13A1P00488 732 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 AFPP02771 609 aaKnown RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 PRNPP04156 253 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 ITGB2P05107 769 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 ZSCAN22P10073 491 aaPredicted RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 C1orf61Q13536 156 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 AUHQ13825 339 aaKnown RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 SPIDRQ14159 915 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 SLC35F3Q8IY50 421 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 SMYD4Q8IYR2 804 aaPredicted RBP16.55■□□□□ 0.24
USP48-210ENST00000489108 FBXO39Q8N4B4 442 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 CCDC3Q9BQI4 270 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 BOCQ9BWV1 1114 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 HDAC8Q9BY41 377 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 SYNDIG1Q9H7V2 258 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 POPDC2Q9HBU9 364 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 ANKMY1Q9P2S6 941 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 CFAP45Q9UL16 551 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 VANGL2Q9ULK5 521 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 HS3ST2Q9Y278 367 aa16.55■□□□□ 0.24
USP48-210ENST00000489108 SYNJ2BP-COX16A0A087WUM0 186 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 PLD2O14939 933 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 GCATO75600 419 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 NTRK1P04629 796 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 RRM1P23921 792 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 ACADSBP45954 432 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 RABIFP47224 123 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 RPIAP49247 311 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 INHBCP55103 352 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 ADKP55263 362 aaKnown RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 YWHAZP63104 245 aaKnown RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 RPS21P63220 83 aaKnown RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 EIF2B5Q13144 721 aaKnown RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 TAF5Q15542 800 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 C14orf80Q86SX3 495 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 JAMLQ86YT9 394 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 RBFAQ8N0V3 343 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 WDR48Q8TAF3 677 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 GRIN3AQ8TCU5 1115 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 FEM1CQ96JP0 617 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 CCDC114Q96M63 670 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 PSMB7Q99436 277 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 SEMA3CQ99985 751 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 TRIM62Q9BVG3 475 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 MUC3BQ9H195 1237 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 TCEAL2Q9H3H9 227 aaPredicted RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 COX16Q9P0S2 106 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 PCDHGA7Q9Y5G6 932 aa16.54■□□□□ 0.24
USP48-210ENST00000489108 TLN1Q9Y490 2541 aaKnown RBP16.54■□□□□ 0.24
USP48-210ENST00000489108 BSNQ9UPA5 3926 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 FLNCQ14315 2725 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 K7ELQ4 463 aaPredicted RBP16.53■□□□□ 0.24
USP48-210ENST00000489108 SLC2A3P11169 496 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 SFTPCP11686 197 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 CCR1P32246 355 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 UGT1A5P35504 534 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 GGCXP38435 758 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 SYKP43405 635 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 KRT83P78385 493 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
USP48-210ENST00000489108 DENND1BQ6P3S1 775 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 RAB11FIP2Q7L804 512 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 B3GNT8Q7Z7M8 397 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 GLMNQ92990 594 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 NAT6Q93015 286 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 LIN37Q96GY3 246 aaPredicted RBP16.53■□□□□ 0.24
USP48-210ENST00000489108 NT5C1BQ96P26 610 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 KLF6Q99612 283 aaPredicted RBP16.53■□□□□ 0.24
USP48-210ENST00000489108 SLC4A5Q9BY07 1137 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 TNKS2Q9H2K2 1166 aa16.53■□□□□ 0.24
USP48-210ENST00000489108 THAP9Q9H5L6 903 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms