RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 HOXA9P31269 272 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 SLC6A4P31645 630 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 CD68P34810 354 aaPredicted RBP12.96□□□□□ -0.33
NELFE-209ENST00000488426 ELK3P41970 407 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 GPX6P59796 221 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 PRPSAP1Q14558 356 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 SLC5A9Q2M3M2 681 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.33
NELFE-209ENST00000488426 FAM182AQ5T1J6 154 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 ADGRF1Q5T601 910 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 EMC10Q5UCC4 262 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 TTC39BQ5VTQ0 682 aaPredicted RBP12.96□□□□□ -0.33
NELFE-209ENST00000488426 LRRC8BQ6P9F7 803 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 PALM2Q8IXS6 379 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 KLHDC8BQ8IXV7 354 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.33
NELFE-209ENST00000488426 TLCD1Q96CP7 247 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
NELFE-209ENST00000488426 AGAP3Q96P47 875 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 TRPC7Q9HCX4 862 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 GKN1Q9NS71 199 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 IPO11Q9UI26 975 aaKnown RBP12.96□□□□□ -0.33
NELFE-209ENST00000488426 CHMP2BQ9UQN3 213 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 CHD5Q8TDI0 1954 aa12.96□□□□□ -0.33
NELFE-209ENST00000488426 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CDH16O75309 829 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 SUN1O94901 812 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 AP2A1O95782 977 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 HDCP19113 662 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 NFKB1P19838 968 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 FSHRP23945 695 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 ATP5DP30049 168 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 OR1E1P30953 314 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 IFNAR2P48551 515 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CDH4P55283 916 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 RASA2Q15283 850 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 LONRF1Q17RB8 773 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CHST9Q7L1S5 443 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 TDRPQ86YL5 185 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 SLC44A3Q8N4M1 653 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 SH2D3CQ8N5H7 860 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 ING5Q8WYH8 240 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 FGF14Q92915 247 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 ASAH2Q9NR71 780 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 BCCIPQ9P287 314 aaKnown RBP eCLIP12.95□□□□□ -0.34
NELFE-209ENST00000488426 EPS15L1Q9UBC2 864 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 LGALS13Q9UHV8 139 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
NELFE-209ENST00000488426 HCN4Q9Y3Q4 1203 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 EXOC1LA0A1B0GW35 172 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 AVILO75366 819 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CLDN11O75508 207 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CPP00450 1065 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
NELFE-209ENST00000488426 IRF1P10914 325 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 NR1D1P20393 614 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CCR2P41597 374 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 MMP13P45452 471 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 RENBPP51606 427 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 SLC7A9P82251 487 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 TDGQ13569 410 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
NELFE-209ENST00000488426 POLD3Q15054 466 aaPredicted RBP12.95□□□□□ -0.34
NELFE-209ENST00000488426 KLHL38Q2WGJ6 581 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 TNFAIP8L3Q5GJ75 292 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 TXNDC8Q6A555 127 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 RFWD3Q6PCD5 774 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 PARM1Q6UWI2 310 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 C3orf62Q6ZUJ4 267 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CIR1Q86X95 450 aaPredicted RBP12.95□□□□□ -0.34
NELFE-209ENST00000488426 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 FBXL6Q8N531 539 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 ARFGAP2Q8N6H7 521 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 CNTD1Q8N815 330 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 ARL14EPQ8N8R7 260 aaPredicted RBP12.95□□□□□ -0.34
NELFE-209ENST00000488426 FGF13Q92913 245 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 TCEAL4Q96EI5 215 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 MYEOVQ96EZ4 313 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 SLC24A2Q9UI40 661 aa12.95□□□□□ -0.34
NELFE-209ENST00000488426 NOVA2Q9UNW9 492 aaKnown RBP12.95□□□□□ -0.34
NELFE-209ENST00000488426 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
NELFE-209ENST00000488426 TRAV19A0A0A6YYK7 116 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 A0A1B0GVM2 712 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 TCAF2A6NFQ2 919 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 AP3B1O00203 1094 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SSTR1P30872 391 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SLCO1A2P46721 670 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 EPHA5P54756 1037 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 CYP4F8P98187 520 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 TNK2Q07912 1038 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 IL10RBQ08334 325 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SERINC3Q13530 473 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 ELMSAN1Q6PJG2 1045 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms