RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ARMC1Q9NVT9 282 aa4.85□□□□□ -1.63
CDC42BPA-213ENST00000488131 FKBP14Q9NWM8 211 aa4.85□□□□□ -1.63
CDC42BPA-213ENST00000488131 DNMT3BQ9UBC3 853 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-213ENST00000488131 RABL2AQ9UBK7 228 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-213ENST00000488131 UBE4BO95155 1302 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 A0A1W2PPW3 197 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ARHGEF37A1IGU5 675 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 DYTNA2CJ06 578 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 XPO1O14980 1071 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 PSTPIP1O43586 416 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 NMT2O60551 498 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 JRKO75564 520 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SORBS2O94875 1100 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 KRT6AP02538 564 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 MT-ND3P03897 115 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 KRT6BP04259 564 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 S100BP04271 92 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ERBB2P04626 1255 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 EPHX1P07099 455 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ENO2P09104 434 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 MSL3P1P0C860 447 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 PLA2G4BP0C869 781 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 BMP3P12645 472 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CD247P20963 164 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 TGM1P22735 817 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CXCR2P25025 360 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 NUMBP49757 651 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 AP3M2P53677 418 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ALDH18A1P54886 795 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC12A3P55017 1021 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 RHBDL3P58872 404 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 NFATC3Q12968 1075 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 EIF2B5Q13144 721 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 PDK1Q15118 436 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SBK1Q52WX2 424 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 C2orf27AQ580R0 203 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 NBPF12Q5TAG4 269 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CES4AQ5XG92 561 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC30A10Q6XR72 485 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 GPBP1Q86WP2 473 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CPNE8Q86YQ8 564 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CRLF3Q8IUI8 442 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 TPH2Q8IWU9 490 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 DEFB107AQ8IZN7 70 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SHISA5Q8N114 240 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 THEMISQ8N1K5 641 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 GALNT4Q8N4A0 578 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 RNF169Q8NCN4 708 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 LMO3Q8TAP4 145 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SUN5Q8TC36 379 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ACMSDQ8TDX5 336 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 GIMAP1Q8WWP7 306 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ATL1Q8WXF7 558 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 RAPGEF4Q8WZA2 1011 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ATP2A3Q93084 1043 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 TTC17Q96AE7 1141 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 E2F7Q96AV8 911 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 TXNDC15Q96J42 360 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 WNK4Q96J92 1243 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 FAR2Q96K12 515 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 MYRFLQ96LU7 910 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 FBXL18Q96ME1 805 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ACAP3Q96P50 834 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 GPR101Q96P66 508 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 ZNF347Q96SE7 839 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 UHRF1Q96T88 793 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 PCDHB18PQ96TA0 734 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 FAM83CQ9BQN1 747 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC39A3Q9BRY0 314 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 RTKNQ9BST9 563 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC13A1Q9BZW2 595 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 NYXQ9GZU5 481 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 HOXD1Q9GZZ0 328 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SMARCAD1Q9H4L7 1026 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 GREM2Q9H772 168 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC38A10Q9HBR0 1119 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 IL17RBQ9NRM6 502 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CNNM1Q9NRU3 951 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 DNAJC28Q9NX36 388 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 TMEM260Q9NX78 707 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 IPO11Q9UI26 975 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 FBXO9Q9UK97 447 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 CDC14AQ9UNH5 594 aa4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 NIP7Q9Y221 180 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 APOBEC2Q9Y235 224 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLX4Q8IY92 1834 aa4.84□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF804BA4D1E1 1349 aa4.84□□□□□ -1.64
CDC42BPA-213ENST00000488131 A0A1W2PQ67 120 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 ILVBLA1L0T0 632 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 C7orf72A4D263 438 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 FAM172BPA6NC97 362 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF839A8K0R7 811 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 J3QRK9 145 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 FOXN3O00409 490 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 ACOX3O15254 700 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 EIF3DO15371 548 aaKnown RBP eCLIP4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 LIASO43766 372 aa4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 GAS2O43903 313 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-213ENST00000488131 NUAK1O60285 661 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms