RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GSTM2P28161 218 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 OAZ1P54368 228 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 TRAF2Q12933 501 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 ALKBH1Q13686 389 aaKnown RBP4.49□□□□□ -1.69
SMC4-219ENST00000487747 GXYLT1Q4G148 440 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 OTUD3Q5T2D3 398 aaPredicted RBP4.49□□□□□ -1.69
SMC4-219ENST00000487747 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 RETSATQ6NUM9 610 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 MON1BQ7L1V2 547 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 RASGRP2Q7LDG7 609 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 TCP11L2Q8N4U5 519 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 TEX45Q8NA69 505 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 SLC2A12Q8TD20 617 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 GPT2Q8TD30 523 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 SLC25A33Q9BSK2 321 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 RTKNQ9BST9 563 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 LHPPQ9H008 270 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.49□□□□□ -1.691e-147■■■■■ 345.5
SMC4-219ENST00000487747 BRD8Q9H0E9 1235 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 GAREM1Q9H706 876 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 SEL1LQ9UBV2 794 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 OSGIN2Q9Y236 505 aa4.49□□□□□ -1.69
SMC4-219ENST00000487747 IGHV4-28A0A0C4DH34 117 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 C17orf100A8MU93 164 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 ITM2AO43736 263 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 SOCS5O75159 536 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 NBPF7P0C2Y1 421 aaPredicted RBP4.48□□□□□ -1.69
SMC4-219ENST00000487747 KRT10P13645 584 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 ENO3P13929 434 aaPredicted RBP4.48□□□□□ -1.69
SMC4-219ENST00000487747 PPM1AP35813 382 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 PCP4P48539 62 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 CTTNQ14247 550 aaKnown RBP4.48□□□□□ -1.69
SMC4-219ENST00000487747 STARD3Q14849 445 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 SF3B4Q15427 424 aaKnown RBP eCLIP4.48□□□□□ -1.691e-7■■■■□ 22.3
SMC4-219ENST00000487747 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 ZNF771Q7L3S4 317 aaPredicted RBP4.48□□□□□ -1.69
SMC4-219ENST00000487747 SERPINA11Q86U17 422 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 WDR5BQ86VZ2 330 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 PALB2Q86YC2 1186 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 SPATA20Q8TB22 786 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 TMEM163Q8TC26 289 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 TMEM41AQ96HV5 264 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 IGSF21Q96ID5 467 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 FRG2BQ96QU4 278 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 NODALQ96S42 347 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 SPRY4Q9C004 299 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 CLPBQ9H078 707 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 DONSONQ9NYP3 566 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 UPB1Q9UBR1 384 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 KLQ9UEF7 1012 aa4.48□□□□□ -1.69
SMC4-219ENST00000487747 AGO1Q9UL18 857 aaKnown RBP4.48□□□□□ -1.69
SMC4-219ENST00000487747 SRPRBQ9Y5M8 271 aaKnown RBP4.48□□□□□ -1.69
SMC4-219ENST00000487747 C17orf102A2RUQ5 167 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 BUB3O43684 328 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 AFPP02771 609 aaKnown RBP4.47□□□□□ -1.69
SMC4-219ENST00000487747 RFC1P35251 1148 aaPredicted RBP4.47□□□□□ -1.69
SMC4-219ENST00000487747 TECP42680 631 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 MXI1P50539 228 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 CDK7P50613 346 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 CLCNKBP51801 687 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 HILS1P60008 231 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 DCTN1Q14203 1278 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 PTK2BQ14289 1009 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 ZRSR1Q15695 479 aaKnown RBP4.47□□□□□ -1.69
SMC4-219ENST00000487747 TBRG1Q3YBR2 411 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 TTC22Q5TAA0 569 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 TBC1D9BQ66K14 1250 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 LIN54Q6MZP7 749 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 ZDHHC23Q8IYP9 409 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 RFLNBQ8N5W9 214 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 TMEM18Q96B42 140 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 DUX5Q96PT3 197 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 KATNAL1Q9BW62 490 aa4.47□□□□□ -1.69
SMC4-219ENST00000487747 ELAC1Q9H777 363 aaKnown RBP4.47□□□□□ -1.69
SMC4-219ENST00000487747 EFCAB8A8MWE9 144 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 RNMTO43148 476 aaKnown RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 SERPINI2O75830 405 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 ACTL6BO94805 426 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 C21orf33P30042 268 aaPredicted RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 DPP6P42658 865 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 ATPAF1Q5TC12 328 aaPredicted RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 SYNE3Q6ZMZ3 975 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 FOXP4Q8IVH2 680 aaPredicted RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 SLC44A2Q8IWA5 706 aaPredicted RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 SCAIQ8N9R8 606 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 MSTO1Q9BUK6 570 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 IFT27Q9BW83 186 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 CADM1Q9BY67 442 aaKnown RBP4.46□□□□□ -1.7
SMC4-219ENST00000487747 NPFFR1Q9GZQ6 430 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 TCF7L2Q9NQB0 619 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 PRDM8Q9NQV8 689 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 KCND3Q9UK17 655 aa4.46□□□□□ -1.7
SMC4-219ENST00000487747 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.45□□□□□ -1.7
SMC4-219ENST00000487747 GOLGA6L3A6NEY3 463 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 KDM4EB2RXH2 506 aaPredicted RBP4.45□□□□□ -1.7
SMC4-219ENST00000487747 EYA2O00167 538 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 SYN3O14994 580 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 FFAR2O15552 330 aa4.45□□□□□ -1.7
SMC4-219ENST00000487747 KRT36O76013 467 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms