RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ERMP1Q7Z2K6 904 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CAMK1DQ8IU85 385 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 EPHX4Q8IUS5 362 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 OFCC1Q8IZS5 231 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 LSMEM2Q8N112 164 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SLC7A14Q8TBB6 771 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SYTL5Q8TDW5 730 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CYGBQ8WWM9 190 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 ISL2Q96A47 359 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 PIWIL1Q96J94 861 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 DHRS1Q96LJ7 313 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 NSMCE3Q96MG7 304 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 FCRL3Q96P31 734 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 RBBP8Q99708 897 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CPNE1Q99829 537 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MTG1Q9BT17 334 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MROQ9BYG7 248 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 ZFYVE28Q9HCC9 887 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MRPL40Q9NQ50 206 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SYBUQ9NX95 663 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SCHIP1Q9P0W5 487 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SYNPO2Q9UMS6 1093 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 NOX1Q9Y5S8 564 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 ST14Q9Y5Y6 855 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 LRRIQ4A6NIV6 560 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CLPXO76031 633 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 IL18RAPO95256 599 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 PIGRP01833 764 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 C2P06681 752 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 HSPA1AP0DMV8 641 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 HSPA1BP0DMV9 641 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MLNP12872 115 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 GTF2A2P52657 109 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 NAGLUP54802 743 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 PRKAA1Q13131 559 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MTERF2Q49AM1 385 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 LDLRAP1Q5SW96 308 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF618Q5T7W0 954 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 LRRC8EQ6NSJ5 796 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 STRA8Q7Z7C7 330 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 WDR49Q8IV35 697 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 TMCO5AQ8N6Q1 288 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 ACVR1CQ8NER5 493 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 HMGCLL1Q8TB92 370 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CERS2Q96G23 380 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 AGAP2Q99490 1192 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MAGEB5Q9BZ81 275 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 UNKQ9C0B0 810 aaKnown RBP10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SIAEQ9HAT2 523 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 TRPV5Q9NQA5 729 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 ARMC1Q9NVT9 282 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 CACNA2D2Q9NY47 1150 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 TMEM9Q9P0T7 183 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 MORF4L1Q9UBU8 362 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 VTI1BQ9UEU0 232 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 SEPT3Q9UH03 358 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 FZD1Q9UP38 647 aa10.8□□□□□ -0.68
CCDC171-208ENST00000486641 LTBP1Q14766 1721 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 MYO18AQ92614 2054 aaKnown RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SCN4AP35499 1836 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 TMEM233B4DJY2 109 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 G3V3G9 751 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 TK2O00142 265 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 CLOCKO15516 846 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 MICAL2O94851 1124 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 MPOP05164 745 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ICAM1P05362 532 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SBK3P0C264 359 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SPRP35270 261 aaPredicted RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 IDUAP35475 653 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SP4Q02446 784 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PPIL2Q13356 520 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 CCDC14Q49A88 953 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PERM1Q5SV97 790 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 INTS11Q5TA45 600 aaKnown RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 LIPMQ5VYY2 423 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 REP15Q6BDI9 236 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 LAYNQ6UX15 382 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ARMCX6Q7L4S7 300 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 DHFR2Q86XF0 187 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 TMEM151AQ8N4L1 468 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PACRGLQ8N7B6 248 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 OR13F1Q8NGS4 319 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 UBA3Q8TBC4 463 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 URGCPQ8TCY9 931 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PTCD2Q8WV60 388 aaKnown RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 EFHD2Q96C19 240 aaPredicted RBP10.79□□□□□ -0.68
CCDC171-208ENST00000486641 FEM1CQ96JP0 617 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 CSF3RQ99062 836 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 PSD2Q9BQI7 771 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 HERC2P3Q9BVR0 1158 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 ADAMTS10Q9H324 1103 aa10.79□□□□□ -0.68
CCDC171-208ENST00000486641 EHD1Q9H4M9 534 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms